| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is proC [H]
Identifier: 91786385
GI number: 91786385
Start: 491027
End: 491863
Strand: Reverse
Name: proC [H]
Synonym: Bpro_0475
Alternate gene names: 91786385
Gene position: 491863-491027 (Counterclockwise)
Preceding gene: 91786386
Following gene: 91786379
Centisome position: 9.46
GC content: 69.3
Gene sequence:
>837_bases ATGAGCACCCCAAACCCAGGCAGCAACGAACACATCGCCTTCATCGGCGGCGGCAACATGGCCAGCGCCGTCATTGGCGG CCTGCTCAAGCAGGGCCTTCCGGCCGGGCAGATCCAGGTGGTGGAACCTTTTGCCGAGCAGCGGGCCAGGCTTGTGCAGC AGTTCGGCGTGGCGGTCAGCGACGCCCCGGGCGCTTCGCTGAGCAGCGCCGGCCTGGTCGTCTGGGCCGTCAAGCCCCAG ACCTTCAAGGAGGCGGCAGCGCAAGCCCGCGCCCACACCCAGGCCGCCCTGCACCTGAGCGTGGCCGCCGGCATCCGCTC GGACAGCATTGCGCAGTGGCTGGGCACCGAGCGCGTGGTGCGCTCCATGCCCAACACGCCGGCACTGGTGGGCAAGGGCA TGACGGCCCTGTTTGCCCGCCCCGCCGCCACCGCCGCGGACCGTGCGGCGGTCGAACGCGTGATCCAGACCACCGGTGAG TATTTGTGGCTGAACGACGAAGTGCAGCTGGATGCCGTGACCGCGCTGTCCGGCTCCGGGCCAGCCTATGTGTTTTACTT CCTTGAGGCCATGATCCAGGCCGGCACGGACATGGGCCTGGAACCCGAGCAGGCCCGCAAGCTGGCCGTGGGAACCTTCG TCGGCGCGTCGGCGCTGGCCCACGCATCGGACGAGCCGCTCGAAGTCCTGCGCGCCCGCGTCACCTCCAAGGGCGGCACC ACCTATGCGGCCCTCACCTCGATGGAGCAGGCAGGCATCAAGCAGCAGTTCATGCAGGCCATCGAGGCCGCCCGGCAACG CGCTGGCGAATTGGGTGACGAGTTCGGCGCCGCCTGA
Upstream 100 bases:
>100_bases GGCAGACGGTGCTTCCGTAAGCCCGGGCCTGCCGGGTCGGCGACAATTCGTTTTCGGGCGGAAACTTCAACGCCGCCGAA CTAAAGCGAGCGACACGAAC
Downstream 100 bases:
>100_bases TCGTGTTCAAACAACCAGCCTGATACCGGGTCCGCCGCGCGCGGGCTTTTTCTTTTTCAATGCAGGCTGGTCAGCCGGAC TCAAGCTGCCAGATAGGACA
Product: pyrroline-5-carboxylate reductase
Products: NA
Alternate protein names: P5C reductase; P5CR [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSTPNPGSNEHIAFIGGGNMASAVIGGLLKQGLPAGQIQVVEPFAEQRARLVQQFGVAVSDAPGASLSSAGLVVWAVKPQ TFKEAAAQARAHTQAALHLSVAAGIRSDSIAQWLGTERVVRSMPNTPALVGKGMTALFARPAATAADRAAVERVIQTTGE YLWLNDEVQLDAVTALSGSGPAYVFYFLEAMIQAGTDMGLEPEQARKLAVGTFVGASALAHASDEPLEVLRARVTSKGGT TYAALTSMEQAGIKQQFMQAIEAARQRAGELGDEFGAA
Sequences:
>Translated_278_residues MSTPNPGSNEHIAFIGGGNMASAVIGGLLKQGLPAGQIQVVEPFAEQRARLVQQFGVAVSDAPGASLSSAGLVVWAVKPQ TFKEAAAQARAHTQAALHLSVAAGIRSDSIAQWLGTERVVRSMPNTPALVGKGMTALFARPAATAADRAAVERVIQTTGE YLWLNDEVQLDAVTALSGSGPAYVFYFLEAMIQAGTDMGLEPEQARKLAVGTFVGASALAHASDEPLEVLRARVTSKGGT TYAALTSMEQAGIKQQFMQAIEAARQRAGELGDEFGAA >Mature_277_residues STPNPGSNEHIAFIGGGNMASAVIGGLLKQGLPAGQIQVVEPFAEQRARLVQQFGVAVSDAPGASLSSAGLVVWAVKPQT FKEAAAQARAHTQAALHLSVAAGIRSDSIAQWLGTERVVRSMPNTPALVGKGMTALFARPAATAADRAAVERVIQTTGEY LWLNDEVQLDAVTALSGSGPAYVFYFLEAMIQAGTDMGLEPEQARKLAVGTFVGASALAHASDEPLEVLRARVTSKGGTT YAALTSMEQAGIKQQFMQAIEAARQRAGELGDEFGAA
Specific function: Proline biosynthesis; third (last) step. [C]
COG id: COG0345
COG function: function code E; Pyrroline-5-carboxylate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyrroline-5-carboxylate reductase family [H]
Homologues:
Organism=Homo sapiens, GI198041662, Length=271, Percent_Identity=30.2583025830258, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI24797097, Length=268, Percent_Identity=30.5970149253731, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI24797095, Length=268, Percent_Identity=30.5970149253731, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI21361454, Length=267, Percent_Identity=29.9625468164794, Blast_Score=98, Evalue=9e-21, Organism=Escherichia coli, GI1786585, Length=266, Percent_Identity=34.2105263157895, Blast_Score=135, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17569021, Length=271, Percent_Identity=32.8413284132841, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17540664, Length=284, Percent_Identity=27.112676056338, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6320861, Length=241, Percent_Identity=31.1203319502075, Blast_Score=113, Evalue=4e-26, Organism=Drosophila melanogaster, GI21358587, Length=265, Percent_Identity=36.2264150943396, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24648116, Length=278, Percent_Identity=30.5755395683453, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24647700, Length=169, Percent_Identity=37.8698224852071, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR000304 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: =1.5.1.2 [H]
Molecular weight: Translated: 28905; Mature: 28774
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00521 P5CR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPNPGSNEHIAFIGGGNMASAVIGGLLKQGLPAGQIQVVEPFAEQRARLVQQFGVAVS CCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCEEC DAPGASLSSAGLVVWAVKPQTFKEAAAQARAHTQAALHLSVAAGIRSDSIAQWLGTERVV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RSMPNTPALVGKGMTALFARPAATAADRAAVERVIQTTGEYLWLNDEVQLDAVTALSGSG HHCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCC PAYVFYFLEAMIQAGTDMGLEPEQARKLAVGTFVGASALAHASDEPLEVLRARVTSKGGT CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC TYAALTSMEQAGIKQQFMQAIEAARQRAGELGDEFGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STPNPGSNEHIAFIGGGNMASAVIGGLLKQGLPAGQIQVVEPFAEQRARLVQQFGVAVS CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCEEC DAPGASLSSAGLVVWAVKPQTFKEAAAQARAHTQAALHLSVAAGIRSDSIAQWLGTERVV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RSMPNTPALVGKGMTALFARPAATAADRAAVERVIQTTGEYLWLNDEVQLDAVTALSGSG HHCCCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCC PAYVFYFLEAMIQAGTDMGLEPEQARKLAVGTFVGASALAHASDEPLEVLRARVTSKGGT CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC TYAALTSMEQAGIKQQFMQAIEAARQRAGELGDEFGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2107123; 10984043; 1676385 [H]