| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is queA [H]
Identifier: 91786377
GI number: 91786377
Start: 482651
End: 483712
Strand: Reverse
Name: queA [H]
Synonym: Bpro_0467
Alternate gene names: 91786377
Gene position: 483712-482651 (Counterclockwise)
Preceding gene: 91786379
Following gene: 91786376
Centisome position: 9.3
GC content: 65.63
Gene sequence:
>1062_bases ATGAAGACGCATTTCAGCCTCAGTGATTTTGATTTCGCACTGCCCGAAGAACTCATTGCCCAGCACCCCGCCGCCCAGCG CAGCGCCTCGCGCCTGCTCGATGGACGGAGCAGCCCCGCCACAGACCGCCGCTTCGCCGACCTGCCCGACCTGCTGACGC CGGGCGACCTGCTGGTGTTCAATGACACCCAGGTGGTCAAGGCGCGGCTGTTCGGCCAAAAATCCACCGGCGGGCGGCTG GAACTGCTGATCGAGCGGGTGTTGCCCGCCCTCGCCGACGCCAGTCATGAAGTCGCCGCGCACATGAAGGTCAGCAAAAA GCCCCAACCCGGCGCCGTGCTGCAGATGGACGGCGGCTTCACCGCCACCCTGCTGGGCCGCTGGCCGCAGGAGGATGGGC CGCTGTACCGCTTTCGCTTCAGCAGCGACCCCTATGCGCTGATGGCGCAGCATGGCCATGTGCCGCTGCCGCCCTATATC ACCCACAGCGACTCTGCCGAGGACGAACTGCGCTACCAGACGGTGTTTGCAAAAAACCCCGGCGCCGTGGCCGCACCCAC CGCCGCCCTGCACTTTGACGAAGCCATGCTCGCGCAGCTGGAGGCGCGCGGCATCGCGCGCGCCAGCGTGACCCTGCATG TGGGCGCGGGCACCTTCCAGCCCGTCAAGACCGAAACAATAGCCGACCACACCATGCATTTCGAGCGCTTTGAGGTGCCG GCCGCCACGCAGCAGGCGATTGCCGCCTGCAAGGCGCGCGGCGGCCGTGTGGTCGCCGTGGGCACCACCACCGTGCGGGC ACTGGAGTCCCACGCCAAATTCGGTCCGGCCTGCGACGACACCAACATCTTCATCACGCCGGGCTTTGAATTTGCCGTGG TGGACCTGCTGCTGACCAACTTTCACCTGCCCAAAAGCACGCTGATGATGCTGGTCAGCGCCTTTGCGGGCTATGAACAC ATCATGGCGCTGTACCAGCATGCGATTGCCGGGCGCTACCGCTTTTTCAGCTATGGCGATGCCATGCTGCTGGCGCGCAA AGCCCCACGCGCAAGCGCCTGA
Upstream 100 bases:
>100_bases TTGCTCCGCCTTGTGGGCAACAGCCCACTGCGTTGTCACGCCTTGCCTGGCGCCGCGCGGGCAGCACACTCGGGCGCATC CAACTGCGGTTTCTAGGTTT
Downstream 100 bases:
>100_bases ACACACCTGCGACAATCACAAGATGCTCGAATTTGAAGTTCTGAAGACCGACGCAAGGACCGGCGAAGGGGCCAATGCCC ACCCCGGCTCGCATGCCCGG
Product: S-adenosylmethionine
Products: NA
Alternate protein names: Queuosine biosynthesis protein queA [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKTHFSLSDFDFALPEELIAQHPAAQRSASRLLDGRSSPATDRRFADLPDLLTPGDLLVFNDTQVVKARLFGQKSTGGRL ELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQMDGGFTATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYI THSDSAEDELRYQTVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMHFERFEVP AATQQAIAACKARGGRVVAVGTTTVRALESHAKFGPACDDTNIFITPGFEFAVVDLLLTNFHLPKSTLMMLVSAFAGYEH IMALYQHAIAGRYRFFSYGDAMLLARKAPRASA
Sequences:
>Translated_353_residues MKTHFSLSDFDFALPEELIAQHPAAQRSASRLLDGRSSPATDRRFADLPDLLTPGDLLVFNDTQVVKARLFGQKSTGGRL ELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQMDGGFTATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYI THSDSAEDELRYQTVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMHFERFEVP AATQQAIAACKARGGRVVAVGTTTVRALESHAKFGPACDDTNIFITPGFEFAVVDLLLTNFHLPKSTLMMLVSAFAGYEH IMALYQHAIAGRYRFFSYGDAMLLARKAPRASA >Mature_353_residues MKTHFSLSDFDFALPEELIAQHPAAQRSASRLLDGRSSPATDRRFADLPDLLTPGDLLVFNDTQVVKARLFGQKSTGGRL ELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQMDGGFTATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYI THSDSAEDELRYQTVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMHFERFEVP AATQQAIAACKARGGRVVAVGTTTVRALESHAKFGPACDDTNIFITPGFEFAVVDLLLTNFHLPKSTLMMLVSAFAGYEH IMALYQHAIAGRYRFFSYGDAMLLARKAPRASA
Specific function: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) [H]
COG id: COG0809
COG function: function code J; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queA family [H]
Homologues:
Organism=Escherichia coli, GI1786606, Length=350, Percent_Identity=52.5714285714286, Blast_Score=348, Evalue=3e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003699 [H]
Pfam domain/function: PF02547 Queuosine_synth [H]
EC number: 5.-.-.- [C]
Molecular weight: Translated: 38440; Mature: 38440
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHFSLSDFDFALPEELIAQHPAAQRSASRLLDGRSSPATDRRFADLPDLLTPGDLLVF CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEE NDTQVVKARLFGQKSTGGRLELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQMDGGF CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCEEEEECCCE TATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYITHSDSAEDELRYQTVFAKNP EEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEEEEECCC GAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMHFERFEVP CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC AATQQAIAACKARGGRVVAVGTTTVRALESHAKFGPACDDTNIFITPGFEFAVVDLLLTN HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH FHLPKSTLMMLVSAFAGYEHIMALYQHAIAGRYRFFSYGDAMLLARKAPRASA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCC >Mature Secondary Structure MKTHFSLSDFDFALPEELIAQHPAAQRSASRLLDGRSSPATDRRFADLPDLLTPGDLLVF CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEE NDTQVVKARLFGQKSTGGRLELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQMDGGF CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCEEEEECCCE TATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYITHSDSAEDELRYQTVFAKNP EEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEEEEECCC GAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMHFERFEVP CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC AATQQAIAACKARGGRVVAVGTTTVRALESHAKFGPACDDTNIFITPGFEFAVVDLLLTN HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH FHLPKSTLMMLVSAFAGYEHIMALYQHAIAGRYRFFSYGDAMLLARKAPRASA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Isomerases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA