| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bugT [H]
Identifier: 91786344
GI number: 91786344
Start: 450179
End: 451162
Strand: Reverse
Name: bugT [H]
Synonym: Bpro_0434
Alternate gene names: 91786344
Gene position: 451162-450179 (Counterclockwise)
Preceding gene: 91786345
Following gene: 91786343
Centisome position: 8.68
GC content: 62.5
Gene sequence:
>984_bases ATGAAAAATCGCCGTCTGGCCCTCGCCCTGATTGCACAGGCAGCTATCAGTTTTGCAGCAATGACCGGGGTGGTTCACGC CCAGTCAGACTACCCGACCAAACCGGTCAAGATCATTGTGCCGTTTCCGCCAGGCGGAACCAGCGACGTGATGGGCCGGA TGCTGGCTGACGAGCTGACCAAAATCCTCAAGCAGCCGTTCATTGTCGAGAACGTTGCCGGTGCGGGCGGCACCATCGGT ACCGACCGCGCCTCCAGGCTGACACCTGACGGCTACACGCTGATCCAGACCGGCGTGGGCCAGAACGCCGTGGCGCACGG GCTGGACGCGAACCTCAAATACAACTCGATGAAGGACTTTGCCCACATCTCGCAGATTCACTCCGGGCCCAACGTGCTGG TGGTCCACCCGGCGACGCCCTACAAAAGTGTCAAGGATGTGGTGGCTTACGCCAAAGCCAACCCCGGCAAGCTGGACTAC GGCTTTACCCACGCCGCGTCCGGGCACATGGCCATGGAGCTGTTCAAGCAGACGGCCGGCATCTACATGACCGGCATTTC CTACCGGGGCGGTGGCCCGATGTTGACCGACATCCTCGGTGGCACGATTCCGATGATGTTCATCAACCAGGACGCGGCGC TGCCCCACGTGAAGGCCGGCAAACTTCGCGCGCTCGCAGTCACCAGCGCGCAGCGCAACCCCCTGTACCCCGACGTGCCG ACCATTGCCGAATCAGGCTACAAGGGCTTTGAGGCGCTGTCCTGGTCGGGCATCTCGGCCATCAAGGGCACGCCACAGCC CATCGTGGACAAGCTGGAGGCTGCCGTGGCGCAGGCCATGCAGTCTGACGCCATCAAGCAGCGCATGGGCTCGGTCGGCT TCATCATCCCGGCGCAAGGCTCCAAACCCTACACCGCCTTCGTGAAGCAGGAAATCGACACCTGGACCCGGGTGATCAAG ACCGCCGGCCTCAAAGCCGAGTAA
Upstream 100 bases:
>100_bases CGATTCAGGGTGAATAACTTAAATGAACAGTATTGGGCTACCCACCCGAAATCACAGCACCGGATAACTGAGTTTTTAAC CCGACCAAGGAGACAATGAC
Downstream 100 bases:
>100_bases GCCAGGGCCGGCCGCTTTTTTCAATGCGCAGTGGGGCCCCATCAGGCACTGCGCCCACAAATCCGGCATTTCACGCAAGA CCATAAATTTCTTCAACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKNRRLALALIAQAAISFAAMTGVVHAQSDYPTKPVKIIVPFPPGGTSDVMGRMLADELTKILKQPFIVENVAGAGGTIG TDRASRLTPDGYTLIQTGVGQNAVAHGLDANLKYNSMKDFAHISQIHSGPNVLVVHPATPYKSVKDVVAYAKANPGKLDY GFTHAASGHMAMELFKQTAGIYMTGISYRGGGPMLTDILGGTIPMMFINQDAALPHVKAGKLRALAVTSAQRNPLYPDVP TIAESGYKGFEALSWSGISAIKGTPQPIVDKLEAAVAQAMQSDAIKQRMGSVGFIIPAQGSKPYTAFVKQEIDTWTRVIK TAGLKAE
Sequences:
>Translated_327_residues MKNRRLALALIAQAAISFAAMTGVVHAQSDYPTKPVKIIVPFPPGGTSDVMGRMLADELTKILKQPFIVENVAGAGGTIG TDRASRLTPDGYTLIQTGVGQNAVAHGLDANLKYNSMKDFAHISQIHSGPNVLVVHPATPYKSVKDVVAYAKANPGKLDY GFTHAASGHMAMELFKQTAGIYMTGISYRGGGPMLTDILGGTIPMMFINQDAALPHVKAGKLRALAVTSAQRNPLYPDVP TIAESGYKGFEALSWSGISAIKGTPQPIVDKLEAAVAQAMQSDAIKQRMGSVGFIIPAQGSKPYTAFVKQEIDTWTRVIK TAGLKAE >Mature_327_residues MKNRRLALALIAQAAISFAAMTGVVHAQSDYPTKPVKIIVPFPPGGTSDVMGRMLADELTKILKQPFIVENVAGAGGTIG TDRASRLTPDGYTLIQTGVGQNAVAHGLDANLKYNSMKDFAHISQIHSGPNVLVVHPATPYKSVKDVVAYAKANPGKLDY GFTHAASGHMAMELFKQTAGIYMTGISYRGGGPMLTDILGGTIPMMFINQDAALPHVKAGKLRALAVTSAQRNPLYPDVP TIAESGYKGFEALSWSGISAIKGTPQPIVDKLEAAVAQAMQSDAIKQRMGSVGFIIPAQGSKPYTAFVKQEIDTWTRVIK TAGLKAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34678; Mature: 34678
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRRLALALIAQAAISFAAMTGVVHAQSDYPTKPVKIIVPFPPGGTSDVMGRMLADELT CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH KILKQPFIVENVAGAGGTIGTDRASRLTPDGYTLIQTGVGQNAVAHGLDANLKYNSMKDF HHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCHHHH AHISQIHSGPNVLVVHPATPYKSVKDVVAYAKANPGKLDYGFTHAASGHMAMELFKQTAG HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC IYMTGISYRGGGPMLTDILGGTIPMMFINQDAALPHVKAGKLRALAVTSAQRNPLYPDVP EEEEEEEECCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC TIAESGYKGFEALSWSGISAIKGTPQPIVDKLEAAVAQAMQSDAIKQRMGSVGFIIPAQG HHHHCCCCCCHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC SKPYTAFVKQEIDTWTRVIKTAGLKAE CCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNRRLALALIAQAAISFAAMTGVVHAQSDYPTKPVKIIVPFPPGGTSDVMGRMLADELT CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH KILKQPFIVENVAGAGGTIGTDRASRLTPDGYTLIQTGVGQNAVAHGLDANLKYNSMKDF HHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCHHHH AHISQIHSGPNVLVVHPATPYKSVKDVVAYAKANPGKLDYGFTHAASGHMAMELFKQTAG HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC IYMTGISYRGGGPMLTDILGGTIPMMFINQDAALPHVKAGKLRALAVTSAQRNPLYPDVP EEEEEEEECCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC TIAESGYKGFEALSWSGISAIKGTPQPIVDKLEAAVAQAMQSDAIKQRMGSVGFIIPAQG HHHHCCCCCCHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC SKPYTAFVKQEIDTWTRVIKTAGLKAE CCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]