Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786337

Identifier: 91786337

GI number: 91786337

Start: 441714

End: 442505

Strand: Reverse

Name: 91786337

Synonym: Bpro_0427

Alternate gene names: NA

Gene position: 442505-441714 (Counterclockwise)

Preceding gene: 91786338

Following gene: 91786336

Centisome position: 8.51

GC content: 68.18

Gene sequence:

>792_bases
ATGCCGTTGCACGCAGTGGGTCACAAGGCCACACCCATGTCCGACGCCGAGCGCCGGGTACGCGAGGATCTGGCCGCCGC
CTACCGGCTGGTGGCGCTCCATGGCATGGACGACAGCATCTACACGCATATTTCCGCGCGTGTCCCCGGCGCCCATGACC
AGTTCCTGATCAACCCCTTCGGGATGCTGTTCCGCGACATCACCGCGTCGTCGCTGGTCAAGATCGACCTCGAGGGACGC
ATCCTGGACGAGTCACCCTACGACGTGAATCCTGCCGGCTTCACCATCCACAGCGCCGTGCACGCGGCGCGCCACGATGC
CGCGTGCGTGCTGCACACCCACACGGTGGCGGGCGTGGCGGTGTCATCGCTCGCCGGCGGGCTGCAGCCCTGCAACCAGT
GGTCGCTGCAGTTCTACAAGCGCGTCGTCTACCACGACTTCGAAGGCATCGCGCTCGACGCAGACGAGCGCGAGCGCCTG
GTCGCCGACCTGGGCCCGACGGCGCGTGCGCTCATCCTGCGCAACCACGGTCTGGTGACGCTGGGGCGCACCATCGCGGA
GGCCTTCATCCTGATGCTCAACCTGGAGCGCGCCTGCCGGGTGCAGGTGGCGATCCAGTCCAGCGGCTCGCCGGTGTATC
CCGTCCCGCACGAGGTCTGCGAAAAAACAGCACGGCAGTACGAGAGCGGCGACAGCAACCGCCTGCCCGGCCTGCCGGAT
CCGGACGCGCGCGAATGGCGCGCGCTGCTGCAGCGGCTGGAGCCTGCCGCGGTCACGTCCTTTCGCGATTGA

Upstream 100 bases:

>100_bases
AATCCGTTATATGTTGACTGTCGACAGTATTCCAACCAGAATCGCCCAAAACAGCACCGGCGCGCTCAAGCCGCGCCTTA
CTTACAGAGGGAAACAAGAT

Downstream 100 bases:

>100_bases
TTTTTCCCTCCCACCCTGCTTCCCTCAACCTCGACAGAGCCACAAGGAGTTCGTTCTCATGAAACGTCGCAACCTCATTC
AAATGGGTGCCGCTGCCGCC

Product: class II aldolase/adducin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPLHAVGHKATPMSDAERRVREDLAAAYRLVALHGMDDSIYTHISARVPGAHDQFLINPFGMLFRDITASSLVKIDLEGR
ILDESPYDVNPAGFTIHSAVHAARHDAACVLHTHTVAGVAVSSLAGGLQPCNQWSLQFYKRVVYHDFEGIALDADERERL
VADLGPTARALILRNHGLVTLGRTIAEAFILMLNLERACRVQVAIQSSGSPVYPVPHEVCEKTARQYESGDSNRLPGLPD
PDAREWRALLQRLEPAAVTSFRD

Sequences:

>Translated_263_residues
MPLHAVGHKATPMSDAERRVREDLAAAYRLVALHGMDDSIYTHISARVPGAHDQFLINPFGMLFRDITASSLVKIDLEGR
ILDESPYDVNPAGFTIHSAVHAARHDAACVLHTHTVAGVAVSSLAGGLQPCNQWSLQFYKRVVYHDFEGIALDADERERL
VADLGPTARALILRNHGLVTLGRTIAEAFILMLNLERACRVQVAIQSSGSPVYPVPHEVCEKTARQYESGDSNRLPGLPD
PDAREWRALLQRLEPAAVTSFRD
>Mature_262_residues
PLHAVGHKATPMSDAERRVREDLAAAYRLVALHGMDDSIYTHISARVPGAHDQFLINPFGMLFRDITASSLVKIDLEGRI
LDESPYDVNPAGFTIHSAVHAARHDAACVLHTHTVAGVAVSSLAGGLQPCNQWSLQFYKRVVYHDFEGIALDADERERLV
ADLGPTARALILRNHGLVTLGRTIAEAFILMLNLERACRVQVAIQSSGSPVYPVPHEVCEKTARQYESGDSNRLPGLPDP
DAREWRALLQRLEPAAVTSFRD

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826325, Length=208, Percent_Identity=46.1538461538462, Blast_Score=183, Evalue=1e-46,
Organism=Homo sapiens, GI29826323, Length=208, Percent_Identity=46.1538461538462, Blast_Score=183, Evalue=1e-46,
Organism=Homo sapiens, GI29826321, Length=199, Percent_Identity=47.7386934673367, Blast_Score=183, Evalue=1e-46,
Organism=Homo sapiens, GI29826319, Length=199, Percent_Identity=47.7386934673367, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI9943848, Length=190, Percent_Identity=40, Blast_Score=148, Evalue=5e-36,
Organism=Homo sapiens, GI9951927, Length=190, Percent_Identity=40, Blast_Score=148, Evalue=5e-36,
Organism=Homo sapiens, GI62912453, Length=190, Percent_Identity=40, Blast_Score=148, Evalue=5e-36,
Organism=Homo sapiens, GI9257190, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=7e-36,
Organism=Homo sapiens, GI297307160, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=8e-36,
Organism=Homo sapiens, GI89276787, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=9e-36,
Organism=Homo sapiens, GI297307158, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=9e-36,
Organism=Homo sapiens, GI9257192, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI115533216, Length=192, Percent_Identity=42.1875, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI115533218, Length=253, Percent_Identity=37.1541501976285, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71989560, Length=249, Percent_Identity=34.9397590361446, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989550, Length=249, Percent_Identity=34.9397590361446, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989544, Length=249, Percent_Identity=34.9397590361446, Blast_Score=125, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989555, Length=249, Percent_Identity=34.9397590361446, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71989541, Length=249, Percent_Identity=34.9397590361446, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281363755, Length=212, Percent_Identity=34.4339622641509, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363751, Length=212, Percent_Identity=34.4339622641509, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24655690, Length=212, Percent_Identity=34.4339622641509, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24655685, Length=208, Percent_Identity=34.6153846153846, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363763, Length=201, Percent_Identity=35.3233830845771, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363757, Length=201, Percent_Identity=35.3233830845771, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI17136738, Length=201, Percent_Identity=35.3233830845771, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363761, Length=208, Percent_Identity=34.6153846153846, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363759, Length=208, Percent_Identity=34.6153846153846, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI281363753, Length=208, Percent_Identity=34.6153846153846, Blast_Score=135, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28928; Mature: 28797

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHAVGHKATPMSDAERRVREDLAAAYRLVALHGMDDSIYTHISARVPGAHDQFLINPF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCEEECHH
GMLFRDITASSLVKIDLEGRILDESPYDVNPAGFTIHSAVHAARHDAACVLHTHTVAGVA
HHHHHHHCHHHEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHH
VSSLAGGLQPCNQWSLQFYKRVVYHDFEGIALDADERERLVADLGPTARALILRNHGLVT
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCEE
LGRTIAEAFILMLNLERACRVQVAIQSSGSPVYPVPHEVCEKTARQYESGDSNRLPGLPD
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDAREWRALLQRLEPAAVTSFRD
CCHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
PLHAVGHKATPMSDAERRVREDLAAAYRLVALHGMDDSIYTHISARVPGAHDQFLINPF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCEEECHH
GMLFRDITASSLVKIDLEGRILDESPYDVNPAGFTIHSAVHAARHDAACVLHTHTVAGVA
HHHHHHHCHHHEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHH
VSSLAGGLQPCNQWSLQFYKRVVYHDFEGIALDADERERLVADLGPTARALILRNHGLVT
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCEE
LGRTIAEAFILMLNLERACRVQVAIQSSGSPVYPVPHEVCEKTARQYESGDSNRLPGLPD
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDAREWRALLQRLEPAAVTSFRD
CCHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]