| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sam [H]
Identifier: 91786328
GI number: 91786328
Start: 430928
End: 431848
Strand: Reverse
Name: sam [H]
Synonym: Bpro_0418
Alternate gene names: 91786328
Gene position: 431848-430928 (Counterclockwise)
Preceding gene: 91786329
Following gene: 91786327
Centisome position: 8.3
GC content: 69.82
Gene sequence:
>921_bases ATGACCACCGCCACCGCCATACTGCGCCCGCCGGGATCGAAGGGCGCCGGCGTCGCTTTCTTCTTCTGCGCGCTGGTGGC CTTCGCCTCCTACGACGCCTTCTGCAAGCAGATGCTGCAGTACTACCCCGCGCCCTTCATCAACCTGATGCGCTACCTGT CGGTGATCTGCATCGCCTTCGCCATGCTGCTGCACCACGGCGACCTGCGCATCTGGCGCGCGCCGCAGAAAAAGCTGCTG GTGCTGCGCGGCGTGATGCTGGGCACGGTGGCCACCTGCTTCATGACGGCATTGATCTGGATGCCGCTGGCCGAGGCCAC GGCGATCTACTTCACGGCGCCGCTGCTCATGGTGGCACTGTCGCCCTGGCTGGTCGGCGAGCAGGTGCGGCGCAGCCGCT GGGTGGCCGTGACGGTCGGCTTTGGCGGCATGCTGCTGATCGTGCGTCCCGGCGGCGATCTGCCCTGGCTGGGCACCGTG CTGATGGCTGTTTCGGCCGTCTGCTACGCGATCTTCCAGCTTCTCACGCGGCGCCTCGCGGGGCTGGTGCCCAGCCCCGT GCAGTACGGCTATACGGCGCTGGTCTGCCTGGCAGTGACCGCCCTGCCGGCACCCTTTTTCCTGCCGGTCCACCGGCCTG CGCCGGGCGAAGTCCTGCTGCTCCTGGCGGGCGGCGCCTGCAGCGGTGCCGCGCAGTGGCTGCTGCTGGCCGCCTTCGAG CGGGTGGAGGCGTCCACCCTCGCGCCCCTGAACTACTTCCAGCTGCTGCTCGCCGTCGCCTTCAGCACTTTCTGGTTCCG CAAGCCGCCCGATGGTCTCGCGATGTCCGGCATTGCGCTGATCGTGGCCGCGGGCATCTACCTGGCGCGCTCCCGGCCGG CGGGCCCCGCCGTCCTGGCCGCTGCGCGCGCAGGCGGGTGA
Upstream 100 bases:
>100_bases TCAGCCACAACGAAGTCGAGGACGCCGACCCGCGCCACCTGGAGGCCGGCGCCAACGTGCTGCTGGGCGCGATGCTGGCG CAGGCAGGGGTCGCCGGCTC
Downstream 100 bases:
>100_bases GAAACTATGCTCCGGCGCGCAAACCCCATAACGAGACAAACCGCATGACTTTTTCCTCCCCATCCGATACCGCTTCCTTT GAATCCGTCGAGGCCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTTATAILRPPGSKGAGVAFFFCALVAFASYDAFCKQMLQYYPAPFINLMRYLSVICIAFAMLLHHGDLRIWRAPQKKLL VLRGVMLGTVATCFMTALIWMPLAEATAIYFTAPLLMVALSPWLVGEQVRRSRWVAVTVGFGGMLLIVRPGGDLPWLGTV LMAVSAVCYAIFQLLTRRLAGLVPSPVQYGYTALVCLAVTALPAPFFLPVHRPAPGEVLLLLAGGACSGAAQWLLLAAFE RVEASTLAPLNYFQLLLAVAFSTFWFRKPPDGLAMSGIALIVAAGIYLARSRPAGPAVLAAARAGG
Sequences:
>Translated_306_residues MTTATAILRPPGSKGAGVAFFFCALVAFASYDAFCKQMLQYYPAPFINLMRYLSVICIAFAMLLHHGDLRIWRAPQKKLL VLRGVMLGTVATCFMTALIWMPLAEATAIYFTAPLLMVALSPWLVGEQVRRSRWVAVTVGFGGMLLIVRPGGDLPWLGTV LMAVSAVCYAIFQLLTRRLAGLVPSPVQYGYTALVCLAVTALPAPFFLPVHRPAPGEVLLLLAGGACSGAAQWLLLAAFE RVEASTLAPLNYFQLLLAVAFSTFWFRKPPDGLAMSGIALIVAAGIYLARSRPAGPAVLAAARAGG >Mature_305_residues TTATAILRPPGSKGAGVAFFFCALVAFASYDAFCKQMLQYYPAPFINLMRYLSVICIAFAMLLHHGDLRIWRAPQKKLLV LRGVMLGTVATCFMTALIWMPLAEATAIYFTAPLLMVALSPWLVGEQVRRSRWVAVTVGFGGMLLIVRPGGDLPWLGTVL MAVSAVCYAIFQLLTRRLAGLVPSPVQYGYTALVCLAVTALPAPFFLPVHRPAPGEVLLLLAGGACSGAAQWLLLAAFER VEASTLAPLNYFQLLLAVAFSTFWFRKPPDGLAMSGIALIVAAGIYLARSRPAGPAVLAAARAGG
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32767; Mature: 32636
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATAILRPPGSKGAGVAFFFCALVAFASYDAFCKQMLQYYPAPFINLMRYLSVICIAF CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AMLLHHGDLRIWRAPQKKLLVLRGVMLGTVATCFMTALIWMPLAEATAIYFTAPLLMVAL HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPWLVGEQVRRSRWVAVTVGFGGMLLIVRPGGDLPWLGTVLMAVSAVCYAIFQLLTRRLA CHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVPSPVQYGYTALVCLAVTALPAPFFLPVHRPAPGEVLLLLAGGACSGAAQWLLLAAFE CCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH RVEASTLAPLNYFQLLLAVAFSTFWFRKPPDGLAMSGIALIVAAGIYLARSRPAGPAVLA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH AARAGG HCCCCC >Mature Secondary Structure TTATAILRPPGSKGAGVAFFFCALVAFASYDAFCKQMLQYYPAPFINLMRYLSVICIAF CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AMLLHHGDLRIWRAPQKKLLVLRGVMLGTVATCFMTALIWMPLAEATAIYFTAPLLMVAL HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPWLVGEQVRRSRWVAVTVGFGGMLLIVRPGGDLPWLGTVLMAVSAVCYAIFQLLTRRLA CHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVPSPVQYGYTALVCLAVTALPAPFFLPVHRPAPGEVLLLLAGGACSGAAQWLLLAAFE CCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH RVEASTLAPLNYFQLLLAVAFSTFWFRKPPDGLAMSGIALIVAAGIYLARSRPAGPAVLA HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH AARAGG HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA