Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786317

Identifier: 91786317

GI number: 91786317

Start: 420252

End: 421421

Strand: Reverse

Name: 91786317

Synonym: Bpro_0407

Alternate gene names: NA

Gene position: 421421-420252 (Counterclockwise)

Preceding gene: 91786323

Following gene: 91786310

Centisome position: 8.1

GC content: 58.38

Gene sequence:

>1170_bases
ATGATGTTAGTTAGAAAAACACAAGAAACCGTATTACAGGCCCTATCGCGTCAAGCCTCCGTCGCGCTGATTGGCCCGCG
CCAAGTGGGCAAAACCACCTTGGCGCTCGAAATTGGCAAACAGCAAAACGCCCTTTACCTTGACCTTGAAGCTATTGAAG
AGCGCGACAAGCTGAGCAACCCGACAGCCTTTTTGTCTGCTTATGAAGACCGGCTGGTCATCTTGGACGAAATTCACCGC
GTGCCCGACCTGTTTTTAACCCTGCGCGGCCTGATTGACCAAGGCCGACGCCATGGCCAGCGTACCGGGCGCTTCTTGTT
GCTCGGCTCGGCTTCGCTGGATTTGATGCGCCAAAGTGGCGAGAGCCTGGCCGGGCGCATCAGCTATATCGACATGACGC
CCTTGAGCGTTCTGGAAGTGCCAACCGATGCAATTGAGGCACTCTGGATACGCGGCGGCTTCCCCGACAGCTTTCTCGCA
CAGGACGACCGGCAAAGCCTGGACTGGCGCAAAGACCTGCTCAGGACCTACCTGGAGCGTGACGTGCCCATGTTTGGCTC
GCGAATTCCGGCCGAAACCCTGCGCCGCTTTTGGACTATGCTGGCGCACAACCAGGGCGCCTTGCACAACGCCTCTCGCC
TGGCCGCAGGCCTGGAAGTAAGCAGCCAGACAGTCAGCCGCTACACCGATTTGCTGGTTGATTTGTTGCTGGTGCGCAGG
CTGCAGCCTTACCACGCCAATGTAGGCAAACGGCTGGTGAAGTCGCCCAAGGTCTACATCCGTGACAGCGGCTTGCTGCA
TGCACTGCTCAACATCGCGGTTAGAGACGCCTTGCTAGGACACCCCGTGGTGGGCGCTAGCTGGGAGGGTTTTGTGATCG
AAAACCTGATTAACGCCGCGCCCGCCTTTACGGTGCCGGGTTTTTATCGCACCTCAGGTGGCGCTGAAATCGATCTGCTT
TTAGAGCTTCCGGGCGGTGAACTCTGGGCGATCGAAGTCAAGCGCAGCCGCGCCGCCAAACCTGCCAGAGGGTTTTACGA
AGCCTGCGAAGACTTGAAGCCCGCCAAGCGCTTTGTGGTTCACGGCGGGCTTGAGCGTTACCCCATTAGTGCGGATGTTG
AAGCGATTGGGATGCGGGAATTGGCGGAGACCTTGTCGCAGCTGGCGTAA

Upstream 100 bases:

>100_bases
TTCGAGAAGTATTCGAGTTCCTGCCTGCCCTGTTTGCCTCATTGCCGGTGCCACCGCAGATGATAACCATGAAAATTAAC
CACTATATGGTAAATTTGCA

Downstream 100 bases:

>100_bases
GTCAAACGGCAAAATCCAGAACGCCACGGTGATGCAATCGCCAGCCTTAGCCCGCCAACAGCGCCGCGTTGCCGCCCGCC
GCCGTCGTATTGACCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MMLVRKTQETVLQALSRQASVALIGPRQVGKTTLALEIGKQQNALYLDLEAIEERDKLSNPTAFLSAYEDRLVILDEIHR
VPDLFLTLRGLIDQGRRHGQRTGRFLLLGSASLDLMRQSGESLAGRISYIDMTPLSVLEVPTDAIEALWIRGGFPDSFLA
QDDRQSLDWRKDLLRTYLERDVPMFGSRIPAETLRRFWTMLAHNQGALHNASRLAAGLEVSSQTVSRYTDLLVDLLLVRR
LQPYHANVGKRLVKSPKVYIRDSGLLHALLNIAVRDALLGHPVVGASWEGFVIENLINAAPAFTVPGFYRTSGGAEIDLL
LELPGGELWAIEVKRSRAAKPARGFYEACEDLKPAKRFVVHGGLERYPISADVEAIGMRELAETLSQLA

Sequences:

>Translated_389_residues
MMLVRKTQETVLQALSRQASVALIGPRQVGKTTLALEIGKQQNALYLDLEAIEERDKLSNPTAFLSAYEDRLVILDEIHR
VPDLFLTLRGLIDQGRRHGQRTGRFLLLGSASLDLMRQSGESLAGRISYIDMTPLSVLEVPTDAIEALWIRGGFPDSFLA
QDDRQSLDWRKDLLRTYLERDVPMFGSRIPAETLRRFWTMLAHNQGALHNASRLAAGLEVSSQTVSRYTDLLVDLLLVRR
LQPYHANVGKRLVKSPKVYIRDSGLLHALLNIAVRDALLGHPVVGASWEGFVIENLINAAPAFTVPGFYRTSGGAEIDLL
LELPGGELWAIEVKRSRAAKPARGFYEACEDLKPAKRFVVHGGLERYPISADVEAIGMRELAETLSQLA
>Mature_389_residues
MMLVRKTQETVLQALSRQASVALIGPRQVGKTTLALEIGKQQNALYLDLEAIEERDKLSNPTAFLSAYEDRLVILDEIHR
VPDLFLTLRGLIDQGRRHGQRTGRFLLLGSASLDLMRQSGESLAGRISYIDMTPLSVLEVPTDAIEALWIRGGFPDSFLA
QDDRQSLDWRKDLLRTYLERDVPMFGSRIPAETLRRFWTMLAHNQGALHNASRLAAGLEVSSQTVSRYTDLLVDLLLVRR
LQPYHANVGKRLVKSPKVYIRDSGLLHALLNIAVRDALLGHPVVGASWEGFVIENLINAAPAFTVPGFYRTSGGAEIDLL
LELPGGELWAIEVKRSRAAKPARGFYEACEDLKPAKRFVVHGGLERYPISADVEAIGMRELAETLSQLA

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 43299; Mature: 43299

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLVRKTQETVLQALSRQASVALIGPRQVGKTTLALEIGKQQNALYLDLEAIEERDKLSN
CCEEEHHHHHHHHHHHCCCCEEEECCHHHCCEEEEEEECCCCCEEEEEHHHHHHHHHCCC
PTAFLSAYEDRLVILDEIHRVPDLFLTLRGLIDQGRRHGQRTGRFLLLGSASLDLMRQSG
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCC
ESLAGRISYIDMTPLSVLEVPTDAIEALWIRGGFPDSFLAQDDRQSLDWRKDLLRTYLER
HHHHCEEEEEECCCHHHHHCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
DVPMFGSRIPAETLRRFWTMLAHNQGALHNASRLAAGLEVSSQTVSRYTDLLVDLLLVRR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LQPYHANVGKRLVKSPKVYIRDSGLLHALLNIAVRDALLGHPVVGASWEGFVIENLINAA
CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PAFTVPGFYRTSGGAEIDLLLELPGGELWAIEVKRSRAAKPARGFYEACEDLKPAKRFVV
CCCCCCCCEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHH
HGGLERYPISADVEAIGMRELAETLSQLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLVRKTQETVLQALSRQASVALIGPRQVGKTTLALEIGKQQNALYLDLEAIEERDKLSN
CCEEEHHHHHHHHHHHCCCCEEEECCHHHCCEEEEEEECCCCCEEEEEHHHHHHHHHCCC
PTAFLSAYEDRLVILDEIHRVPDLFLTLRGLIDQGRRHGQRTGRFLLLGSASLDLMRQSG
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCC
ESLAGRISYIDMTPLSVLEVPTDAIEALWIRGGFPDSFLAQDDRQSLDWRKDLLRTYLER
HHHHCEEEEEECCCHHHHHCCHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
DVPMFGSRIPAETLRRFWTMLAHNQGALHNASRLAAGLEVSSQTVSRYTDLLVDLLLVRR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LQPYHANVGKRLVKSPKVYIRDSGLLHALLNIAVRDALLGHPVVGASWEGFVIENLINAA
CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PAFTVPGFYRTSGGAEIDLLLELPGGELWAIEVKRSRAAKPARGFYEACEDLKPAKRFVV
CCCCCCCCEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHH
HGGLERYPISADVEAIGMRELAETLSQLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]