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The map label for this gene is asnC [C]

Identifier: 91786310

GI number: 91786310

Start: 411641

End: 412066

Strand: Reverse

Name: asnC [C]

Synonym: Bpro_0400

Alternate gene names: 91786310

Gene position: 412066-411641 (Counterclockwise)

Preceding gene: 91786317

Following gene: 91786309

Centisome position: 7.92

GC content: 61.97

Gene sequence:

>426_bases
ATGGATGCACTCGACCAACAATTGCTTTCTCTTTTGCGCAAAGATGCGCGCACCAACGTGGCCACGCTGGCCCAGAAGCT
GGGGGTTTCGCGCGGCACGGTGACCAATCGCATCACCAAGCTGGAAGACGCCGGCATCATCGTCGGCTATACCGTGCGCC
TGCGACCCGACGCGCAACCCAATGAGATCAAGGCCTGGATGAGCATTGCCGTGGAAGGCAATGAGGCCCGCAAAGTCATT
GCCAGCCTGCTGGGTGAGCCCGGGGTCGCCACGCTGCACGACACGAATGGCCGCTGGGACCTGCTGGCCGAACTGCGCGC
CCAGAACCTGTCCGAACTGTCCAAGGTGCTGGAGCGGATCCGCCTTATCCGGGGCATCAGCAGCACGGAATCCAGCATCC
ACCTCGAAACCTACCGGATGACCTGA

Upstream 100 bases:

>100_bases
CGCAGTGTCTCAAGAAGGCATTTCAATAGAAATGATCAAGGCTGATAGTTTTTTGTCATATTTCTAGCAAATAGCTACCC
AAAAATGCCAGAATGACAGG

Downstream 100 bases:

>100_bases
GAATGGCCGCATCCGCAACCCGCACCTCCACGCATGCGGCGGCAGCGCCTCCCTTTGCCTGATTGACCTTCATGAGCGAA
CCCCACATCGAGATCGACCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDALDQQLLSLLRKDARTNVATLAQKLGVSRGTVTNRITKLEDAGIIVGYTVRLRPDAQPNEIKAWMSIAVEGNEARKVI
ASLLGEPGVATLHDTNGRWDLLAELRAQNLSELSKVLERIRLIRGISSTESSIHLETYRMT

Sequences:

>Translated_141_residues
MDALDQQLLSLLRKDARTNVATLAQKLGVSRGTVTNRITKLEDAGIIVGYTVRLRPDAQPNEIKAWMSIAVEGNEARKVI
ASLLGEPGVATLHDTNGRWDLLAELRAQNLSELSKVLERIRLIRGISSTESSIHLETYRMT
>Mature_141_residues
MDALDQQLLSLLRKDARTNVATLAQKLGVSRGTVTNRITKLEDAGIIVGYTVRLRPDAQPNEIKAWMSIAVEGNEARKVI
ASLLGEPGVATLHDTNGRWDLLAELRAQNLSELSKVLERIRLIRGISSTESSIHLETYRMT

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=138, Percent_Identity=29.7101449275362, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 15605; Mature: 15605

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALDQQLLSLLRKDARTNVATLAQKLGVSRGTVTNRITKLEDAGIIVGYTVRLRPDAQP
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCH
NEIKAWMSIAVEGNEARKVIASLLGEPGVATLHDTNGRWDLLAELRAQNLSELSKVLERI
HHHHHHHHHEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH
RLIRGISSTESSIHLETYRMT
HHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDALDQQLLSLLRKDARTNVATLAQKLGVSRGTVTNRITKLEDAGIIVGYTVRLRPDAQP
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCH
NEIKAWMSIAVEGNEARKVIASLLGEPGVATLHDTNGRWDLLAELRAQNLSELSKVLERI
HHHHHHHHHEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH
RLIRGISSTESSIHLETYRMT
HHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]