Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is chqB [H]

Identifier: 91786267

GI number: 91786267

Start: 373453

End: 374319

Strand: Direct

Name: chqB [H]

Synonym: Bpro_0357

Alternate gene names: 91786267

Gene position: 373453-374319 (Clockwise)

Preceding gene: 91786266

Following gene: 91786268

Centisome position: 7.18

GC content: 51.9

Gene sequence:

>867_bases
ATGAACCACCACCTTATTGATAGCGAAGCAAGCGTCACCCGGTTTGTAATTGCCGCAATGTCCGACACCCAGGATCCTCG
CCTCAAACGGATCATGGAGTGCGCTGTGCAGCATTTGCACGCATTTGCTCGCGAATGCGATCTGTCTGAAGATGAGCTTG
AAGCCGGACTGCGATTCATTACAGAAATAGGACAGCAAACTCACCATAGCCATAACGAGGTTGTGCTGGCGGCTGATGTG
CTTGGTCTGTCTACTCTGGTTGCCTTACGAAACAACCCCTCAGCTCATGGGCAAACCGCAGCGGCACTATTGGGGCCGTT
CTGGCGTAAGGACGCTCCAATCTGTACCAATGGGGAAAGTATTGCGAGGACGCCATCCAGTCACCCTTCTCTAGAGGTTT
CAGGCTACGTTAGGGACGATGCGGGTAATCCTATAACGCAGGCGCAGGTTGACGTTTGGCAGGCCTCGCCAACGGGACTA
TATGAGAACCAAGACGCTGCCCAAGAAGACATGAATCTGCGCGGCCGATTCTTAACGGACGACAAAGGTCGATATCTTTT
CAAGACAGTCAGGCCCGCTGGCTATCCGGTTCCGACAGACGGTTCGGTCGGCAAGTTATTGCGAGCACAAAAGCGCCATC
CATACCGCCCGGCACATATTCACTTCATGGTGTCTGCCCCCGGTCACAAGACACTGATCACGCAGGTCTTTGCCGACGAC
TCTGAATATCTGTCTACTGATGTCGTTCTTGGTGTGACCAAAGCTTTGGTGGGCATGTTCCAAGAAAAAGATGGTTGTTA
TTCGCTGAACTATGACTTCGTATTGCAAGAGGGAATTTCAAAGTTCCCAGAACCCCCCATTAAATAG

Upstream 100 bases:

>100_bases
TCACCCTGTCTGGAAGTGCCAGCGAAGTGCAGGCTGATCCTGCCGTTAGAGCTAGTTATTTGGGCGAAATTGCAAACGAT
TGCATGAAAGATTGATTTAA

Downstream 100 bases:

>100_bases
AGAGCCAAATTTTGACTATTTCAACACTCCCTTTATCTGGCCAAGTTGCTGTCGTCGTGGGTGGCGGCGGAGGTATTGGT
AAGGCTGCAGCGGGCCGCCT

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: 1,2-HQD [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNHHLIDSEASVTRFVIAAMSDTQDPRLKRIMECAVQHLHAFARECDLSEDELEAGLRFITEIGQQTHHSHNEVVLAADV
LGLSTLVALRNNPSAHGQTAAALLGPFWRKDAPICTNGESIARTPSSHPSLEVSGYVRDDAGNPITQAQVDVWQASPTGL
YENQDAAQEDMNLRGRFLTDDKGRYLFKTVRPAGYPVPTDGSVGKLLRAQKRHPYRPAHIHFMVSAPGHKTLITQVFADD
SEYLSTDVVLGVTKALVGMFQEKDGCYSLNYDFVLQEGISKFPEPPIK

Sequences:

>Translated_288_residues
MNHHLIDSEASVTRFVIAAMSDTQDPRLKRIMECAVQHLHAFARECDLSEDELEAGLRFITEIGQQTHHSHNEVVLAADV
LGLSTLVALRNNPSAHGQTAAALLGPFWRKDAPICTNGESIARTPSSHPSLEVSGYVRDDAGNPITQAQVDVWQASPTGL
YENQDAAQEDMNLRGRFLTDDKGRYLFKTVRPAGYPVPTDGSVGKLLRAQKRHPYRPAHIHFMVSAPGHKTLITQVFADD
SEYLSTDVVLGVTKALVGMFQEKDGCYSLNYDFVLQEGISKFPEPPIK
>Mature_288_residues
MNHHLIDSEASVTRFVIAAMSDTQDPRLKRIMECAVQHLHAFARECDLSEDELEAGLRFITEIGQQTHHSHNEVVLAADV
LGLSTLVALRNNPSAHGQTAAALLGPFWRKDAPICTNGESIARTPSSHPSLEVSGYVRDDAGNPITQAQVDVWQASPTGL
YENQDAAQEDMNLRGRFLTDDKGRYLFKTVRPAGYPVPTDGSVGKLLRAQKRHPYRPAHIHFMVSAPGHKTLITQVFADD
SEYLSTDVVLGVTKALVGMFQEKDGCYSLNYDFVLQEGISKFPEPPIK

Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.37 [H]

Molecular weight: Translated: 31804; Mature: 31804

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHHLIDSEASVTRFVIAAMSDTQDPRLKRIMECAVQHLHAFARECDLSEDELEAGLRFI
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TEIGQQTHHSHNEVVLAADVLGLSTLVALRNNPSAHGQTAAALLGPFWRKDAPICTNGES
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH
IARTPSSHPSLEVSGYVRDDAGNPITQAQVDVWQASPTGLYENQDAAQEDMNLRGRFLTD
HHCCCCCCCCEEEEEEEECCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEC
DKGRYLFKTVRPAGYPVPTDGSVGKLLRAQKRHPYRPAHIHFMVSAPGHKTLITQVFADD
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCCC
SEYLSTDVVLGVTKALVGMFQEKDGCYSLNYDFVLQEGISKFPEPPIK
HHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNHHLIDSEASVTRFVIAAMSDTQDPRLKRIMECAVQHLHAFARECDLSEDELEAGLRFI
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TEIGQQTHHSHNEVVLAADVLGLSTLVALRNNPSAHGQTAAALLGPFWRKDAPICTNGES
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH
IARTPSSHPSLEVSGYVRDDAGNPITQAQVDVWQASPTGLYENQDAAQEDMNLRGRFLTD
HHCCCCCCCCEEEEEEEECCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEC
DKGRYLFKTVRPAGYPVPTDGSVGKLLRAQKRHPYRPAHIHFMVSAPGHKTLITQVFADD
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCCC
SEYLSTDVVLGVTKALVGMFQEKDGCYSLNYDFVLQEGISKFPEPPIK
HHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141483 [H]