Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is nrtB [H]

Identifier: 91786202

GI number: 91786202

Start: 305642

End: 306505

Strand: Reverse

Name: nrtB [H]

Synonym: Bpro_0291

Alternate gene names: 91786202

Gene position: 306505-305642 (Counterclockwise)

Preceding gene: 91786203

Following gene: 91786201

Centisome position: 5.89

GC content: 61.0

Gene sequence:

>864_bases
ATGAAATCATTAAATCTCAAGGCGGGCCTGGTCTCGCTGCTCATCTTCCTGGCCTTCCTGGGCATCTGGTACACCGCCAC
GCTGCCTTCGCCCGGCACGCCCGTAGCCAGCACCGCGGGACTGAGCGCCGAACAGATCGAATACCAGAAGATGATGGGCA
AGGACCCGGGCAGTACCAAGACCACCGGATTTCCGACGCTGGGCCAGATGGGCGCGGCGATCTGGAAGCAGGTCTCCAAC
CCGCTGTATGACAACGGCCCCAATGACAAGGGCATTTTGATCCAGCTCGGCCATTCGCTGGCGCGCGTGGGCCTGGGCTT
TTTGCTGGCCTGCGCGGTGGCCGTGCCGCTAGGCTTTGTGATCGGCATGTCGCCCCTGCTGCGGCGTGCGTTTGACCCCT
TCATCCAGGTGCTCAAGCCGATCTCGCCGCTGGCCTGGATGCCGCTGGCGCTTTACACCATCAAGGACTCGTCCATCTCG
GGCATCTTTGTGATTTTCATCTGCTCGGTCTGGCCCATGCTGATCAACACGGCCTTTGGCGTGTCAGCCGTCAAGCGCGA
GTGGCTCAATGTGGCCAGCACGCTGGAAGTCAGCCCGCTGCGCAAGGCCTTCCTGGTGATCCTGCCAGCGGCAGCGCCCA
CCATTTTTACCGGCATGCGCATTTCCATGGGCATCGCCTGGCTGGTGATTGTGGCCGCCGAGATGCTGGTGGGCGGCACC
GGCATTGGCTACTTTGTCTGGAACGAGTGGAACAACCTGTCGCTGACCAACGTGATCTTTGCCATTCTCGTGATCGGCAT
CGTCGGCATGCTGCTGGACCTCAGCTTTGCCCAGTTGCAGAAGATGGTGACGTATGTGGAGTGA

Upstream 100 bases:

>100_bases
CCCTCAAGGGGCCGCTGCGCCTGCGGCCCGGCAAAGCCGGTTCCGCGGCCCCTGCTTGGTTCTCATTGAAATCCCACGCT
CGCTCACTTCTTGTAGCTCC

Downstream 100 bases:

>100_bases
AGCCGCCATGCGCCCCGCCTTGCACACCGACACGACGGGCCTTCAGGGCCCTCACGCAGCACCCAGCCTCTCCCGGAAAG
AACACAGCATGCAGGGATTC

Product: nitrate transport permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN
PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS
GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT
GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE

Sequences:

>Translated_287_residues
MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN
PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS
GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT
GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE
>Mature_287_residues
MKSLNLKAGLVSLLIFLAFLGIWYTATLPSPGTPVASTAGLSAEQIEYQKMMGKDPGSTKTTGFPTLGQMGAAIWKQVSN
PLYDNGPNDKGILIQLGHSLARVGLGFLLACAVAVPLGFVIGMSPLLRRAFDPFIQVLKPISPLAWMPLALYTIKDSSIS
GIFVIFICSVWPMLINTAFGVSAVKREWLNVASTLEVSPLRKAFLVILPAAAPTIFTGMRISMGIAWLVIVAAEMLVGGT
GIGYFVWNEWNNLSLTNVIFAILVIGIVGMLLDLSFAQLQKMVTYVE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=200, Percent_Identity=32.5, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081802, Length=155, Percent_Identity=30.3225806451613, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30882; Mature: 30882

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]