Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786187

Identifier: 91786187

GI number: 91786187

Start: 292872

End: 293495

Strand: Reverse

Name: 91786187

Synonym: Bpro_0276

Alternate gene names: NA

Gene position: 293495-292872 (Counterclockwise)

Preceding gene: 91786188

Following gene: 91786183

Centisome position: 5.64

GC content: 59.78

Gene sequence:

>624_bases
ATGGCGGACGATCCAATGTCGATGTATCACGAGGGAATGCGGCGCCTTCAGGACGTGCGCGAAACACGTCCTCTGGCGGA
CCGCCTGGAGCAGGTGACTGTTCGCGCGGCGTTTACCGGAGAAGACCGGGCATTTATAGAGCGCTGCCCCATGTTCTTCA
TCGCCACAGCTGACGCCAGCGGCCATCCCGACTGTTCCTATAAAGGCGGCTTGCCCGGATTCGTGCACGTGCTGGACGAT
CACACCCTTGCCATTCCTGATTACGATGGCAACGGAATGTACAGATCCTGGGGGAATGCTCTGCTCAACCCCCATGTCGG
GCTTTTGTTCCTGGACTTCGAAAACCCGAAGCGACTTCGGGTGAATGGTACAGCGCAGGTCAGCGAAAATGACCCCTTGC
GCGCCGAGTACCCGGGTTCGGTGTTCATCGTTCGCGTCACGGCAACGCGCATCTTTCCAAACTGCCCTCGCTACATCCAC
AAGATGCAACTGGTCGACTACTCGGCCTACGCACCCAAGTCGGGGTACACGCCGCCAGTCCCTGCGTGGAAAACGTTTGA
TGCCTTTCGCGATGCCCTGCCGGCTCGCGACCGTCCGGACGGCAAGAAAGAGGGAGGCCCCTGA

Upstream 100 bases:

>100_bases
GACGGCTTGTGCAATGAGCGCTGACTACACGCAGTAGTCTTCCCCCTGGCGCCATCACAAAACGTCAGGGTTCGGTCCCA
CTGACCTGCCGGGAGGAACC

Downstream 100 bases:

>100_bases
AGGCCGACTTCATCAGTCCCCGACTGCAAACCGTCCCATGACAGCGCCCCAGCACCTTCTGCCGCGCGGCGCCGCCGGTG
TCCGCCGGGTGCTGGCGGAC

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Phosphohydrolase; Hydrolase; Pyridoxamine 5-Phosphate Oxidase Family; Pyridoxamine 5-Phosphate Oxidase-Related Protein; Pyridoxine 5`-Phosphate Oxidase Protein; Pyridoxamine 5-Phosphate Oxidase-Related; Flavodoxin Reductase; Pyridoxine 5-Phosphate Oxidase; Oxidoreductase; Flavohemoprotein; NTP Pyrophosphohydrolase; Pyridoxine 5-Phosphate Oxidase Protein; Pyridoxamine 5\-Phosphate Oxidase Family Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MADDPMSMYHEGMRRLQDVRETRPLADRLEQVTVRAAFTGEDRAFIERCPMFFIATADASGHPDCSYKGGLPGFVHVLDD
HTLAIPDYDGNGMYRSWGNALLNPHVGLLFLDFENPKRLRVNGTAQVSENDPLRAEYPGSVFIVRVTATRIFPNCPRYIH
KMQLVDYSAYAPKSGYTPPVPAWKTFDAFRDALPARDRPDGKKEGGP

Sequences:

>Translated_207_residues
MADDPMSMYHEGMRRLQDVRETRPLADRLEQVTVRAAFTGEDRAFIERCPMFFIATADASGHPDCSYKGGLPGFVHVLDD
HTLAIPDYDGNGMYRSWGNALLNPHVGLLFLDFENPKRLRVNGTAQVSENDPLRAEYPGSVFIVRVTATRIFPNCPRYIH
KMQLVDYSAYAPKSGYTPPVPAWKTFDAFRDALPARDRPDGKKEGGP
>Mature_206_residues
ADDPMSMYHEGMRRLQDVRETRPLADRLEQVTVRAAFTGEDRAFIERCPMFFIATADASGHPDCSYKGGLPGFVHVLDDH
TLAIPDYDGNGMYRSWGNALLNPHVGLLFLDFENPKRLRVNGTAQVSENDPLRAEYPGSVFIVRVTATRIFPNCPRYIHK
MQLVDYSAYAPKSGYTPPVPAWKTFDAFRDALPARDRPDGKKEGGP

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23264; Mature: 23132

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDPMSMYHEGMRRLQDVRETRPLADRLEQVTVRAAFTGEDRAFIERCPMFFIATADAS
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHCCEEEEEECCCC
GHPDCSYKGGLPGFVHVLDDHTLAIPDYDGNGMYRSWGNALLNPHVGLLFLDFENPKRLR
CCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHCCHHCCCCCEEEEEECCCCCEEE
VNGTAQVSENDPLRAEYPGSVFIVRVTATRIFPNCPRYIHKMQLVDYSAYAPKSGYTPPV
ECCEEEECCCCCCEEECCCCEEEEEEEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PAWKTFDAFRDALPARDRPDGKKEGGP
CCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADDPMSMYHEGMRRLQDVRETRPLADRLEQVTVRAAFTGEDRAFIERCPMFFIATADAS
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHCCEEEEEECCCC
GHPDCSYKGGLPGFVHVLDDHTLAIPDYDGNGMYRSWGNALLNPHVGLLFLDFENPKRLR
CCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHCCHHCCCCCEEEEEECCCCCEEE
VNGTAQVSENDPLRAEYPGSVFIVRVTATRIFPNCPRYIHKMQLVDYSAYAPKSGYTPPV
ECCEEEECCCCCCEEECCCCEEEEEEEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PAWKTFDAFRDALPARDRPDGKKEGGP
CCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA