| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786183
Identifier: 91786183
GI number: 91786183
Start: 288236
End: 288706
Strand: Reverse
Name: 91786183
Synonym: Bpro_0272
Alternate gene names: NA
Gene position: 288706-288236 (Counterclockwise)
Preceding gene: 91786187
Following gene: 91786181
Centisome position: 5.55
GC content: 58.81
Gene sequence:
>471_bases ATGAGAAACACGTTTGCCGCATTGTCTGCAACACTGGTCCTGGCCGGCCTGGCGGCGCCTCCGGTCTGGGCACAATCGGG TGGCCACATGATGATGATGCCGGACGAGATGAAATGGGCGGATATCCCTTCGCTGCCTGCGGGCGCCAAGATATCTGTAC TGGAGGGCCCGCTCAGCGAGGCAGTCCCGTTTACCTTTCGCCTGAAATTCCCGGCAAATTACCAGATAGCCGCCCATTGG CATCCGGCAATCGAGCATGTCACGGTAATTTCCGGCACGTTCAATATGGGGGCCGGAGACAAGCTGGACACCACCAAAAC AATGGCACTGTCCGCTGGCGCCGTCGCCATCATGCAACCCAAAACTGCCCACTTTGCCTGGACCCGGGATGAGACCATTG TGCAGGTCCATGGCGTGGGGCCGTGGGGAGTGACCTACGTGAATCCAGCCGACGACCCGCGTAAAAAATAA
Upstream 100 bases:
>100_bases GCTGTTCGTTGTTGTTGGTCTCAGGATAGAGGGGTGTGAAGGAGCCGACGCCCTCCGTGTCATGTTTCACGGGCTCCAAA AAAAATCGCAGGAGATCCTC
Downstream 100 bases:
>100_bases GGAAATAAAGGGCATCCGCCCCCTGCCGCTGGACGGCGGGGGCGCGCGGTCCTTATTTCAACGCGCCAAACACCTTCTTC AGAATGTCGCTGCCAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Haem Peroxidase / Cupin Rmlc-Type
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRNTFAALSATLVLAGLAAPPVWAQSGGHMMMMPDEMKWADIPSLPAGAKISVLEGPLSEAVPFTFRLKFPANYQIAAHW HPAIEHVTVISGTFNMGAGDKLDTTKTMALSAGAVAIMQPKTAHFAWTRDETIVQVHGVGPWGVTYVNPADDPRKK
Sequences:
>Translated_156_residues MRNTFAALSATLVLAGLAAPPVWAQSGGHMMMMPDEMKWADIPSLPAGAKISVLEGPLSEAVPFTFRLKFPANYQIAAHW HPAIEHVTVISGTFNMGAGDKLDTTKTMALSAGAVAIMQPKTAHFAWTRDETIVQVHGVGPWGVTYVNPADDPRKK >Mature_156_residues MRNTFAALSATLVLAGLAAPPVWAQSGGHMMMMPDEMKWADIPSLPAGAKISVLEGPLSEAVPFTFRLKFPANYQIAAHW HPAIEHVTVISGTFNMGAGDKLDTTKTMALSAGAVAIMQPKTAHFAWTRDETIVQVHGVGPWGVTYVNPADDPRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16751; Mature: 16751
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTFAALSATLVLAGLAAPPVWAQSGGHMMMMPDEMKWADIPSLPAGAKISVLEGPLSE CCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC AVPFTFRLKFPANYQIAAHWHPAIEHVTVISGTFNMGAGDKLDTTKTMALSAGAVAIMQP CCCEEEEEECCCCEEEEEECCCCCEEEEEEECEECCCCCCCCCCCEEEEECCCEEEEECC KTAHFAWTRDETIVQVHGVGPWGVTYVNPADDPRKK CCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCC >Mature Secondary Structure MRNTFAALSATLVLAGLAAPPVWAQSGGHMMMMPDEMKWADIPSLPAGAKISVLEGPLSE CCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC AVPFTFRLKFPANYQIAAHWHPAIEHVTVISGTFNMGAGDKLDTTKTMALSAGAVAIMQP CCCEEEEEECCCCEEEEEECCCCCEEEEEEECEECCCCCCCCCCCEEEEECCCEEEEECC KTAHFAWTRDETIVQVHGVGPWGVTYVNPADDPRKK CCCEEEEECCCEEEEEECCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA