| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mreC [H]
Identifier: 91786134
GI number: 91786134
Start: 243530
End: 244453
Strand: Direct
Name: mreC [H]
Synonym: Bpro_0223
Alternate gene names: 91786134
Gene position: 243530-244453 (Clockwise)
Preceding gene: 91786133
Following gene: 91786135
Centisome position: 4.68
GC content: 67.75
Gene sequence:
>924_bases ATGCCCTTAGGAACCCTCGACAGATCCCCGCCGCCCTTCTTCAAGCAGGGGCCGTCGGCGCTGTCCAAGCTGATGTTTTT CAGCGCCTTGTCGCTGTTCCTGATGGTGGCGGACACGCGCTTTCGCATCACCCAGCCGGTGCGCGCGGCGCTTGCCACCG CGCTCTACCCGGTGCAGTGGCTGGCGCTGCAGCCGGTGCGTGCCGTCAAGGGCGGCAGTGACTATTTCATCAGCCTGAAC CAGGCCCAGTCCAGCAGCGAGGAAGCCCGCAAAAAACTCGCGCTGCAGTCGCTGCGCGCCAGCCAGGTGGAGCAGCTGTC GCAGGAAAACAGCCGCCTGCGCAAGCTGCTGGGCCTGCGTGAGCAGCTCGCCACGCCGGTGCTGGCCGCCGAGGTGCTGT ATGACGCGGCCGATCCTTACACCCGCAAGGTCATCATCGACAAGGGAATGGCCCAGGGCGTGGATCTCGGCTCGCCCGTG GTCGATGAGTCCGGTGTGCTGGGGCAGGTCACCCGCGTGCACCCGCTGGTGAGTGAGGTCACGCTGGTGGTGGACCGCGA CCTGGCCATTCCGGTGCTCAATGTGCGCACCGGCGCGCGCAGTGTGGCCTATGGCGACCCGGGCGCGCCTGGCAGCGGGC TGGAACTGCGCTTCATGGGCAGCAACTCCGATGTACAGCAGGGCGACATGCTGACCACCAGCGGGGTCGACGGCGTCTAC CCGCCGGGCCTGCCGGTGGCAACCATCACCCGGATCGAGCGGCGCGCCGAATCGGCCTTCGCCAAGATTTACTGCGCGCC GCAGGCGCTGGTGACGGGGGCCCGGCATGTCATGGTGGTCAAGCCCTTGTCGAGCCAGATCCCGCCGCAGCCCGAGGCCG AAGCGCCATCCGTCCCGGCCAAGAAGAAGGGCGCCGCCAAATGA
Upstream 100 bases:
>100_bases TCTTCACGTCGGAGTAAGGTGCTGCCGCCCGCCGTCCTTCACCAGCCCGCCTTCGCCTGCGCGCAGATCGCATGAAGCAG GGCCAGCCTGACAGCGCACC
Downstream 100 bases:
>100_bases TCATGCGCTCCGGCCAGCAACTGCTGCTGCCCGCCAACCCGGTCTTCATCTGGTGCAGCCTGATCGCGGCCTTGCTGCTG GACATGCTGCCGCTGGGCCG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPLGTLDRSPPPFFKQGPSALSKLMFFSALSLFLMVADTRFRITQPVRAALATALYPVQWLALQPVRAVKGGSDYFISLN QAQSSSEEARKKLALQSLRASQVEQLSQENSRLRKLLGLREQLATPVLAAEVLYDAADPYTRKVIIDKGMAQGVDLGSPV VDESGVLGQVTRVHPLVSEVTLVVDRDLAIPVLNVRTGARSVAYGDPGAPGSGLELRFMGSNSDVQQGDMLTTSGVDGVY PPGLPVATITRIERRAESAFAKIYCAPQALVTGARHVMVVKPLSSQIPPQPEAEAPSVPAKKKGAAK
Sequences:
>Translated_307_residues MPLGTLDRSPPPFFKQGPSALSKLMFFSALSLFLMVADTRFRITQPVRAALATALYPVQWLALQPVRAVKGGSDYFISLN QAQSSSEEARKKLALQSLRASQVEQLSQENSRLRKLLGLREQLATPVLAAEVLYDAADPYTRKVIIDKGMAQGVDLGSPV VDESGVLGQVTRVHPLVSEVTLVVDRDLAIPVLNVRTGARSVAYGDPGAPGSGLELRFMGSNSDVQQGDMLTTSGVDGVY PPGLPVATITRIERRAESAFAKIYCAPQALVTGARHVMVVKPLSSQIPPQPEAEAPSVPAKKKGAAK >Mature_306_residues PLGTLDRSPPPFFKQGPSALSKLMFFSALSLFLMVADTRFRITQPVRAALATALYPVQWLALQPVRAVKGGSDYFISLNQ AQSSSEEARKKLALQSLRASQVEQLSQENSRLRKLLGLREQLATPVLAAEVLYDAADPYTRKVIIDKGMAQGVDLGSPVV DESGVLGQVTRVHPLVSEVTLVVDRDLAIPVLNVRTGARSVAYGDPGAPGSGLELRFMGSNSDVQQGDMLTTSGVDGVYP PGLPVATITRIERRAESAFAKIYCAPQALVTGARHVMVVKPLSSQIPPQPEAEAPSVPAKKKGAAK
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=258, Percent_Identity=32.1705426356589, Blast_Score=127, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 32840; Mature: 32709
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLGTLDRSPPPFFKQGPSALSKLMFFSALSLFLMVADTRFRITQPVRAALATALYPVQW CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH LALQPVRAVKGGSDYFISLNQAQSSSEEARKKLALQSLRASQVEQLSQENSRLRKLLGLR HHHCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLATPVLAAEVLYDAADPYTRKVIIDKGMAQGVDLGSPVVDESGVLGQVTRVHPLVSEV HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLVVDRDLAIPVLNVRTGARSVAYGDPGAPGSGLELRFMGSNSDVQQGDMLTTSGVDGVY HHEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCC PPGLPVATITRIERRAESAFAKIYCAPQALVTGARHVMVVKPLSSQIPPQPEAEAPSVPA CCCCCHHHHHHHHHHHHHHHHHHEECHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCC KKKGAAK CCCCCCC >Mature Secondary Structure PLGTLDRSPPPFFKQGPSALSKLMFFSALSLFLMVADTRFRITQPVRAALATALYPVQW CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH LALQPVRAVKGGSDYFISLNQAQSSSEEARKKLALQSLRASQVEQLSQENSRLRKLLGLR HHHCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQLATPVLAAEVLYDAADPYTRKVIIDKGMAQGVDLGSPVVDESGVLGQVTRVHPLVSEV HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLVVDRDLAIPVLNVRTGARSVAYGDPGAPGSGLELRFMGSNSDVQQGDMLTTSGVDGVY HHEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCC PPGLPVATITRIERRAESAFAKIYCAPQALVTGARHVMVVKPLSSQIPPQPEAEAPSVPA CCCCCHHHHHHHHHHHHHHHHHHEECHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCC KKKGAAK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2687239; 9278503; 3049542 [H]