| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pyrE [H]
Identifier: 91786128
GI number: 91786128
Start: 237276
End: 238031
Strand: Direct
Name: pyrE [H]
Synonym: Bpro_0217
Alternate gene names: 91786128
Gene position: 237276-238031 (Clockwise)
Preceding gene: 91786124
Following gene: 91786129
Centisome position: 4.56
GC content: 62.96
Gene sequence:
>756_bases ATGAGCACGGCAGGGCAGACAGACAAAGCGGACAAGGCGCAGGCAACTCCCGCAGACACCACGCTGGCACAGGAATTCGT GCAGTTTGCGCTGGAATCGGGTGTGCTGCGGTTTGGCGAATTCAAGACCAAGGCCGGGCGCCTGAGCCCCTATTTTTTCA ACGCGGGCCTGTTTGACGACGGCGCCAAGCTGGGCCGCCTGGCGCAATTTTATGCGCGCCACCTGCTGGCCGAGGCCCAG CGCAGCGGGCTGGAGTTTGACATGATTTTCGGCCCCGCGTACAAGGGCATTCCGCTGGCCGCCGCCGTCGCCGTCGAACT GGCGCGGCAGGGCCGCAATGTCCCCTTTGCCTACAACCGCAAGGAGGCCAAGGACCATGGCGAAGGAGGCACGCTGGTCG GGGCGCCCGTCAAGGGGCGCGTGCTGATCATTGATGACGTGATGTCAGCCGGCACGGCGGCGCGCGAATCGATTGCCATC ATCCAGGCCGCCGGCGCCACACCCCATGCGATGGTGCTCGCGCTGGACCGGCAGGAAAAAGCCACCGAGAATGGCGTGGA TGTTAACCACAGCGCGGTGCAATATGTAACGAATCAGCTGGGTTTGCAGGTTTGTGCGATTGCGCGCCTGACCGACTTGC TGCAGTATCTCTCCAGGCAAGGCGACGTGTCGACGCCAGGGGCCTCTGGCGCGTTGTCCTTAAAAGCCCACTATCAGGCT GTGCTGGCTTATCGGGAACGCTATGGCGTGGAATGA
Upstream 100 bases:
>100_bases TCCGGTAGGGACTGGGCAATCCAGTCCTCCAGGCCTTTGCTGGTAGCGGAACGGATACCGTTGAGGTTGAGGCTGGTTAA TTTGAACAAGGACATCTCCA
Downstream 100 bases:
>100_bases GGAGTCGAATTGCTTTTGCAAACAGCGTTGACGGCGGGGCTGGTGCTGGCCACCTGCCTGTGCGGTGAGGCCGCAGCCCA GAGCATCTACACCTGTGTCG
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSTAGQTDKADKAQATPADTTLAQEFVQFALESGVLRFGEFKTKAGRLSPYFFNAGLFDDGAKLGRLAQFYARHLLAEAQ RSGLEFDMIFGPAYKGIPLAAAVAVELARQGRNVPFAYNRKEAKDHGEGGTLVGAPVKGRVLIIDDVMSAGTAARESIAI IQAAGATPHAMVLALDRQEKATENGVDVNHSAVQYVTNQLGLQVCAIARLTDLLQYLSRQGDVSTPGASGALSLKAHYQA VLAYRERYGVE
Sequences:
>Translated_251_residues MSTAGQTDKADKAQATPADTTLAQEFVQFALESGVLRFGEFKTKAGRLSPYFFNAGLFDDGAKLGRLAQFYARHLLAEAQ RSGLEFDMIFGPAYKGIPLAAAVAVELARQGRNVPFAYNRKEAKDHGEGGTLVGAPVKGRVLIIDDVMSAGTAARESIAI IQAAGATPHAMVLALDRQEKATENGVDVNHSAVQYVTNQLGLQVCAIARLTDLLQYLSRQGDVSTPGASGALSLKAHYQA VLAYRERYGVE >Mature_250_residues STAGQTDKADKAQATPADTTLAQEFVQFALESGVLRFGEFKTKAGRLSPYFFNAGLFDDGAKLGRLAQFYARHLLAEAQR SGLEFDMIFGPAYKGIPLAAAVAVELARQGRNVPFAYNRKEAKDHGEGGTLVGAPVKGRVLIIDDVMSAGTAARESIAII QAAGATPHAMVLALDRQEKATENGVDVNHSAVQYVTNQLGLQVCAIARLTDLLQYLSRQGDVSTPGASGALSLKAHYQAV LAYRERYGVE
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=190, Percent_Identity=25.2631578947368, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1790073, Length=228, Percent_Identity=48.2456140350877, Blast_Score=207, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17508631, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323530, Length=199, Percent_Identity=48.7437185929648, Blast_Score=179, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323927, Length=242, Percent_Identity=43.3884297520661, Blast_Score=172, Evalue=5e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 26805; Mature: 26673
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAGQTDKADKAQATPADTTLAQEFVQFALESGVLRFGEFKTKAGRLSPYFFNAGLFDD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCC GAKLGRLAQFYARHLLAEAQRSGLEFDMIFGPAYKGIPLAAAVAVELARQGRNVPFAYNR CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECC KEAKDHGEGGTLVGAPVKGRVLIIDDVMSAGTAARESIAIIQAAGATPHAMVLALDRQEK CHHHCCCCCCCEEECCCCCCEEEEECHHHCCHHHHHHEEEEEECCCCCCEEEEEECCHHH ATENGVDVNHSAVQYVTNQLGLQVCAIARLTDLLQYLSRQGDVSTPGASGALSLKAHYQA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH VLAYRERYGVE HHHHHHHHCCC >Mature Secondary Structure STAGQTDKADKAQATPADTTLAQEFVQFALESGVLRFGEFKTKAGRLSPYFFNAGLFDD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCC GAKLGRLAQFYARHLLAEAQRSGLEFDMIFGPAYKGIPLAAAVAVELARQGRNVPFAYNR CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECC KEAKDHGEGGTLVGAPVKGRVLIIDDVMSAGTAARESIAIIQAAGATPHAMVLALDRQEK CHHHCCCCCCCEEECCCCCCEEEEECHHHCCHHHHHHEEEEEECCCCCCEEEEEECCHHH ATENGVDVNHSAVQYVTNQLGLQVCAIARLTDLLQYLSRQGDVSTPGASGALSLKAHYQA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHH VLAYRERYGVE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA