Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yvrH [H]

Identifier: 91786124

GI number: 91786124

Start: 233589

End: 233975

Strand: Direct

Name: yvrH [H]

Synonym: Bpro_0213

Alternate gene names: 91786124

Gene position: 233589-233975 (Clockwise)

Preceding gene: 91786123

Following gene: 91786128

Centisome position: 4.49

GC content: 66.41

Gene sequence:

>387_bases
ATGCCCGCACCACTCCAACGCATTTTGTATGTTGAAGACGAGCCCGACATCCGCGTCGTGGCGAAAATGGCCCTGGAGGC
CGTCGGCAAGTTCACGGTGATCCCCTGCGCCTCCGGGCAGGAGGCGCTGAGCGTGGCCCCCGGCGCCGCAGCCGACCTGC
TGCTGCTCGACGTCATGATGCCGGGCATGGACGGGCCCAGCACGCTCAAGGCCTTGCGCGCAATGCCTGCCACGGCCGGC
ACGCCGGTGATCTTCATGACCGCCAAGGTGCAGGCCTCGGAGATTGCGGCGTACAAGGCGCTGGGCGCGCTGGATGTGAT
TCCCAAGCCCTTTGACCCAATGGAGCTTTCCGCGCAGATCCAGCAGATCTGGGCCGCGCGGGGTTGA

Upstream 100 bases:

>100_bases
AGGCCCACACCTCCAATACCGAGCTGTTAAATACAATTCAGCGTATCCTCCAGATTCCCGGAGACCCCGGCCCCACCCGT
CCCCAACCTCTGATCTGACC

Downstream 100 bases:

>100_bases
GTCCAGAGCCCGCTCTCGGGGTTGAAGGTGCTGTCAGCCCCTGACCCACATCCATCGCTTGAGTTGTCCCATCAAGCAGG
CAACACTGCACTGGGGGTCT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPAPLQRILYVEDEPDIRVVAKMALEAVGKFTVIPCASGQEALSVAPGAAADLLLLDVMMPGMDGPSTLKALRAMPATAG
TPVIFMTAKVQASEIAAYKALGALDVIPKPFDPMELSAQIQQIWAARG

Sequences:

>Translated_128_residues
MPAPLQRILYVEDEPDIRVVAKMALEAVGKFTVIPCASGQEALSVAPGAAADLLLLDVMMPGMDGPSTLKALRAMPATAG
TPVIFMTAKVQASEIAAYKALGALDVIPKPFDPMELSAQIQQIWAARG
>Mature_127_residues
PAPLQRILYVEDEPDIRVVAKMALEAVGKFTVIPCASGQEALSVAPGAAADLLLLDVMMPGMDGPSTLKALRAMPATAGT
PVIFMTAKVQASEIAAYKALGALDVIPKPFDPMELSAQIQQIWAARG

Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=35.5932203389831, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=34.7457627118644, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI2367329, Length=119, Percent_Identity=40.3361344537815, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=36.2068965517241, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13433; Mature: 13302

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPLQRILYVEDEPDIRVVAKMALEAVGKFTVIPCASGQEALSVAPGAAADLLLLDVMM
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCHHHHHHHHHHC
PGMDGPSTLKALRAMPATAGTPVIFMTAKVQASEIAAYKALGALDVIPKPFDPMELSAQI
CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QQIWAARG
HHHHHCCC
>Mature Secondary Structure 
PAPLQRILYVEDEPDIRVVAKMALEAVGKFTVIPCASGQEALSVAPGAAADLLLLDVMM
CCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCHHHHHHHHHHC
PGMDGPSTLKALRAMPATAGTPVIFMTAKVQASEIAAYKALGALDVIPKPFDPMELSAQI
CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QQIWAARG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]