Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is ktrA [H]

Identifier: 91786125

GI number: 91786125

Start: 234130

End: 234804

Strand: Reverse

Name: ktrA [H]

Synonym: Bpro_0214

Alternate gene names: 91786125

Gene position: 234804-234130 (Counterclockwise)

Preceding gene: 91786126

Following gene: 91786120

Centisome position: 4.52

GC content: 62.81

Gene sequence:

>675_bases
TTGTTGGATAAGACATTCCCCCCCAAATCGGACAGCGTGATGGTGATTGGCCTGGGGCGCTTTGGCACCGGCGTGGCCCA
GGCGTTGGTGACGCTGGGCCATGACGTGCTGGCCATTGACTCCAGCGCCGAGACCGTGCAACGCCTGGCCAGCACCCTGC
CGCATGTGGTGCAGGCCGACGCCACTCACACGGAAACCCTCAAGCAACTGGGCGCACAGGACTTTGCCCATGCGGTGGTC
AGCATCGGGTCTGATCTCGAAAGCAGCGTGCTCACGGTGCTCAACCTGAGCCAGATCGGCATCAAGGACATCTGGGCCAA
GGCCAACAGCCAGCAACATGGGCGCATCGCCGAGCGGGTGGGCGCCCACCATGTGGTTTACCCCGAGGCCGACATGGGCG
CCCGGGTGGCGCATCTGGTCACGGGGAAGATGATTGACTTCATTGAGTTTGATGACGGCTTTGCCATCGCCAAGACGCAT
GCGCCTCGCGAAACCCATGACAAGCCCCTGTCGCAGTCGCAAGTCCGCTCCCGCCATGGCGTGACCATTGTGGGTATCAA
GCGGCGGCACCAGGATTTCATCTACGCCAGACCCGAGACCGAGATCCAGCCCGGTGACCTGCTCATCGTGGCCGGCTCGA
CTGACATGGTGGAGCGCTTTGCCGGACGCTTCTGA

Upstream 100 bases:

>100_bases
GTCCTGATGTTCACCGGCCGGGTGGGCGTGGTTACCTTGGCCGCTTCCATGGCGATGAACCACGCGCGCCGCGATTTTCG
ATACCCCGAGGAGAAACCCA

Downstream 100 bases:

>100_bases
CAAGGGCATGATGATGGCGGGCCAGCCATTCATCAAATAAGTCGCAAACTACGCAGACCCCCAGTGCAGTGTTGCCTGCT
TGATGGGACAACTCAAGCGA

Product: TrkA-N

Products: NA

Alternate protein names: K(+)-uptake protein ktrA [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV
SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH
APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF

Sequences:

>Translated_224_residues
MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV
SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH
APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF
>Mature_224_residues
MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQADATHTETLKQLGAQDFAHAVV
SIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERVGAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTH
APRETHDKPLSQSQVRSRHGVTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF

Specific function: Catalytic subunit of the ktrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and ktrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24303; Mature: 24303

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQAD
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC
ATHTETLKQLGAQDFAHAVVSIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERV
CHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH
GAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTHAPRETHDKPLSQSQVRSRHG
CCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCC
VTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF
EEEEEEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC
>Mature Secondary Structure
MLDKTFPPKSDSVMVIGLGRFGTGVAQALVTLGHDVLAIDSSAETVQRLASTLPHVVQAD
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCC
ATHTETLKQLGAQDFAHAVVSIGSDLESSVLTVLNLSQIGIKDIWAKANSQQHGRIAERV
CHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHH
GAHHVVYPEADMGARVAHLVTGKMIDFIEFDDGFAIAKTHAPRETHDKPLSQSQVRSRHG
CCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHCC
VTIVGIKRRHQDFIYARPETEIQPGDLLIVAGSTDMVERFAGRF
EEEEEEEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 12086676 [H]