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The map label for this gene is ompR [H]

Identifier: 91786119

GI number: 91786119

Start: 225919

End: 226641

Strand: Reverse

Name: ompR [H]

Synonym: Bpro_0208

Alternate gene names: 91786119

Gene position: 226641-225919 (Counterclockwise)

Preceding gene: 91786120

Following gene: 91786118

Centisome position: 4.36

GC content: 67.08

Gene sequence:

>723_bases
ATGACGCAGCAACTCCTGATGATCGAAGACGATTCCCGCCTGGCCGCCATGGTGGGCGAGTACCTGCGCCAGTCCGGTTA
CGGCTTTACCCACGCGGCCGATGGCGCCAGCGGCCTGGCCGCCCTGCAGGCCAGCCCCCCCGACCTGGTCATCCTGGATC
TGATGCTGCCCGACATGGACGGCCTGGAAGTGTGCCGCCGCATCAAGAGCCAGGGCAGCGAGTCGGCGCACACCGCGGTG
CTGATGCTCACGGCCAAGGGCGACCCGATGGACCGCATCATCGGCCTGGAAATCGGTGCGGACGATTACCTGCCCAAACC
GTTCGAGCCGCGCGAACTGCTGGCACGCATCCGTGCGGTGCTGCGCCGCGGCGGCGAGGCCAATGGCGCCGGCGGCGCTG
CGGCCGGTGGCCACAAGGTGATGCGCTTCGGCTCCTTGGAAATCGATCGCGACGCGCGCACGGTATCAATTTCCGGCAAT
CTCTGCGAACTCACCTCCTACCAGTTCGACCTGCTGGTGGCGCTGGCCGAGCGCGCCGGCCGCGTGCTCAGCCGCGACCA
GATCATGGAAGCCGTGCGCGGCCGTGAACTGGAAGCCTTTGACCGCTCCATCGATGTGCACATGGGCCGCATCCGCAGCG
CGATTGAGGCCGACCCCAAAGACCCCAAGCGCATCCTCACGGTGCGCGGCGTGGGCTACGTCTTTGCCAAGCAGCAGGAT
TGA

Upstream 100 bases:

>100_bases
ACTTTACGATGGCTTCAAGCGGGCTTGTTGCGCCGCGCGCAGCATTGGCTTTACCGCAACCCACCCGAAGGGAACACCCC
CTGCAACCGAGGACCCGACC

Downstream 100 bases:

>100_bases
AAGCGCTGTCCATGTGGATCCGTTTTACGTCCCACCTCTACGTGCGCATCTGGCTCGCCGTGGTGGCAACCGTGGTGGTG
CTCACCTTCCTGGTGGGCGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTQQLLMIEDDSRLAAMVGEYLRQSGYGFTHAADGASGLAALQASPPDLVILDLMLPDMDGLEVCRRIKSQGSESAHTAV
LMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAVLRRGGEANGAGGAAAGGHKVMRFGSLEIDRDARTVSISGN
LCELTSYQFDLLVALAERAGRVLSRDQIMEAVRGRELEAFDRSIDVHMGRIRSAIEADPKDPKRILTVRGVGYVFAKQQD

Sequences:

>Translated_240_residues
MTQQLLMIEDDSRLAAMVGEYLRQSGYGFTHAADGASGLAALQASPPDLVILDLMLPDMDGLEVCRRIKSQGSESAHTAV
LMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAVLRRGGEANGAGGAAAGGHKVMRFGSLEIDRDARTVSISGN
LCELTSYQFDLLVALAERAGRVLSRDQIMEAVRGRELEAFDRSIDVHMGRIRSAIEADPKDPKRILTVRGVGYVFAKQQD
>Mature_239_residues
TQQLLMIEDDSRLAAMVGEYLRQSGYGFTHAADGASGLAALQASPPDLVILDLMLPDMDGLEVCRRIKSQGSESAHTAVL
MLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAVLRRGGEANGAGGAAAGGHKVMRFGSLEIDRDARTVSISGNL
CELTSYQFDLLVALAERAGRVLSRDQIMEAVRGRELEAFDRSIDVHMGRIRSAIEADPKDPKRILTVRGVGYVFAKQQD

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=233, Percent_Identity=45.4935622317597, Blast_Score=194, Evalue=3e-51,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=34.6153846153846, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1790860, Length=233, Percent_Identity=36.0515021459227, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1786599, Length=238, Percent_Identity=35.7142857142857, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI2367329, Length=235, Percent_Identity=37.0212765957447, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=33.4745762711864, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=37.0689655172414, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI145693140, Length=239, Percent_Identity=33.0543933054393, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI87082012, Length=233, Percent_Identity=34.7639484978541, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787229, Length=237, Percent_Identity=31.6455696202532, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=32.3275862068966, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1789402, Length=235, Percent_Identity=34.0425531914894, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=31.7596566523605, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1790552, Length=237, Percent_Identity=32.4894514767932, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=32.520325203252, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26081; Mature: 25950

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQLLMIEDDSRLAAMVGEYLRQSGYGFTHAADGASGLAALQASPPDLVILDLMLPDMD
CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC
GLEVCRRIKSQGSESAHTAVLMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAV
HHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHH
LRRGGEANGAGGAAAGGHKVMRFGSLEIDRDARTVSISGNLCELTSYQFDLLVALAERAG
HHCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH
RVLSRDQIMEAVRGRELEAFDRSIDVHMGRIRSAIEADPKDPKRILTVRGVGYVFAKQQD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCC
>Mature Secondary Structure 
TQQLLMIEDDSRLAAMVGEYLRQSGYGFTHAADGASGLAALQASPPDLVILDLMLPDMD
CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC
GLEVCRRIKSQGSESAHTAVLMLTAKGDPMDRIIGLEIGADDYLPKPFEPRELLARIRAV
HHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHH
LRRGGEANGAGGAAAGGHKVMRFGSLEIDRDARTVSISGNLCELTSYQFDLLVALAERAG
HHCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHH
RVLSRDQIMEAVRGRELEAFDRSIDVHMGRIRSAIEADPKDPKRILTVRGVGYVFAKQQD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]