| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is rstB [H]
Identifier: 91786118
GI number: 91786118
Start: 224585
End: 225907
Strand: Reverse
Name: rstB [H]
Synonym: Bpro_0207
Alternate gene names: 91786118
Gene position: 225907-224585 (Counterclockwise)
Preceding gene: 91786119
Following gene: 91786117
Centisome position: 4.34
GC content: 66.89
Gene sequence:
>1323_bases ATGTGGATCCGTTTTACGTCCCACCTCTACGTGCGCATCTGGCTCGCCGTGGTGGCAACCGTGGTGGTGCTCACCTTCCT GGTGGGCGCGGCCTGGCGGCTGAGCGCCGACCCGCCGCAGCTGCCCATTCGCGAGGTGCTGGTTCACAACGCAGCGGGCG AAGTCATCGGCACGGCGCAAACCCGGCCGGACCGCAAACTCGGCGACGACCTCGAATTTGATGTGCTCACCAAAGACGGC CAGAGCCTGAACCTGCTGCTGCCCCGTCCCAAACGGCCGCCCGGCAACCCGCCGTGGATGCGCCCCCCTTTCGGTTTCGG CTTTGGCTGGATGCTGGTCCTCGTAGGCCTGGCCGTGGCGCTGGGCGCCTACCCGGTGATGCGGCGCCTGACCTTGCGGC TCGAAGCGCTGCAGCGCGGCGTGGAGCGCTGGGGCGCCGGCGACCTGTCGGCGCGCGTCAATGCCGACGGGCGTGACGAG GTGGCTTTCCTGGCCGAACGGTTCAACCACGCGGCCGAACGCATTGAAACCCTGATGGAGTCGCACAAATCCCTGCTGGC CAATGCCTCCCATGAGCTGCGCTCGCCATTAGCGCGCATCCGCATGGGCCTGGAATTAATGGCCCCCACGCTTGTCGCTT CGCGTGCCTCCGGCGTTGCGCTGCCCCTTTCCTCTGAAGTTGGGGCTAATTTTCCTGGGGGCGGCCCGTCGGAAAATTCC GGGGCGCCCAAGTACTCCCCCGCTCTTGTCGAAGAAATCTACCGCAGCATCAACGAACTCGACCAGCTGATCGACGAGAT CCTGTTGGCCAGCCGACTCGATGCCAAGCAGGCCGATGCCGAGCCTTTTGAAACCGTGGACCTGACCGGGCTGGCCGCCG AGGAATGCTCGCGCGTCAATGCCGAGCTGCAGGCCGAACTGGGGACCGGTCTAGGCATTGCGCCCTCCGGCCACAGCCTG ACGGTGCAGGGCTCGCCACGGCTGCTGCGCCGGCTGATCCGCAACCTGCTGGAAAACGCCAGGCGTTACAGCAATGGCGA CATCAGCCTGGAGCTGGCGCAAATTCGCGTTGGTATCCGGCAACTGGCCGTCGTCCGGGTTCACGATCGGGGGCCGGGCG TGCCTGCCGGCCAGCGCGAACGCATTTTTGAGCCGTTCTACCGGCTGCCGGGTGCCAGCGAGCGCGAGGGTGGCGTCGGC CTGGGGCTAGCGCTGGTCAAGTCCATCAGCCTGCGCCACGGCGGCAGCGTGCGCTGCGAAGCCCGTCCGGGCGGCGGCGC GTCATTCATTGTGGAACTCCCCGCCGCAAGCCAGAGGGCATGA
Upstream 100 bases:
>100_bases GCAGCGCGATTGAGGCCGACCCCAAAGACCCCAAGCGCATCCTCACGGTGCGCGGCGTGGGCTACGTCTTTGCCAAGCAG CAGGATTGAAAGCGCTGTCC
Downstream 100 bases:
>100_bases AGGTACGCCGGAAATTCTGCGTGCCCGCTCAAAAAAATCTTGCTTTCTCCTCCATTTAGGGGATGGTCATACGGAAAAGC TTGGCCTACAGTTTCATTGT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MWIRFTSHLYVRIWLAVVATVVVLTFLVGAAWRLSADPPQLPIREVLVHNAAGEVIGTAQTRPDRKLGDDLEFDVLTKDG QSLNLLLPRPKRPPGNPPWMRPPFGFGFGWMLVLVGLAVALGAYPVMRRLTLRLEALQRGVERWGAGDLSARVNADGRDE VAFLAERFNHAAERIETLMESHKSLLANASHELRSPLARIRMGLELMAPTLVASRASGVALPLSSEVGANFPGGGPSENS GAPKYSPALVEEIYRSINELDQLIDEILLASRLDAKQADAEPFETVDLTGLAAEECSRVNAELQAELGTGLGIAPSGHSL TVQGSPRLLRRLIRNLLENARRYSNGDISLELAQIRVGIRQLAVVRVHDRGPGVPAGQRERIFEPFYRLPGASEREGGVG LGLALVKSISLRHGGSVRCEARPGGGASFIVELPAASQRA
Sequences:
>Translated_440_residues MWIRFTSHLYVRIWLAVVATVVVLTFLVGAAWRLSADPPQLPIREVLVHNAAGEVIGTAQTRPDRKLGDDLEFDVLTKDG QSLNLLLPRPKRPPGNPPWMRPPFGFGFGWMLVLVGLAVALGAYPVMRRLTLRLEALQRGVERWGAGDLSARVNADGRDE VAFLAERFNHAAERIETLMESHKSLLANASHELRSPLARIRMGLELMAPTLVASRASGVALPLSSEVGANFPGGGPSENS GAPKYSPALVEEIYRSINELDQLIDEILLASRLDAKQADAEPFETVDLTGLAAEECSRVNAELQAELGTGLGIAPSGHSL TVQGSPRLLRRLIRNLLENARRYSNGDISLELAQIRVGIRQLAVVRVHDRGPGVPAGQRERIFEPFYRLPGASEREGGVG LGLALVKSISLRHGGSVRCEARPGGGASFIVELPAASQRA >Mature_440_residues MWIRFTSHLYVRIWLAVVATVVVLTFLVGAAWRLSADPPQLPIREVLVHNAAGEVIGTAQTRPDRKLGDDLEFDVLTKDG QSLNLLLPRPKRPPGNPPWMRPPFGFGFGWMLVLVGLAVALGAYPVMRRLTLRLEALQRGVERWGAGDLSARVNADGRDE VAFLAERFNHAAERIETLMESHKSLLANASHELRSPLARIRMGLELMAPTLVASRASGVALPLSSEVGANFPGGGPSENS GAPKYSPALVEEIYRSINELDQLIDEILLASRLDAKQADAEPFETVDLTGLAAEECSRVNAELQAELGTGLGIAPSGHSL TVQGSPRLLRRLIRNLLENARRYSNGDISLELAQIRVGIRQLAVVRVHDRGPGVPAGQRERIFEPFYRLPGASEREGGVG LGLALVKSISLRHGGSVRCEARPGGGASFIVELPAASQRA
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=335, Percent_Identity=29.8507462686567, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1790346, Length=269, Percent_Identity=32.7137546468402, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1788393, Length=303, Percent_Identity=30.6930693069307, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789808, Length=341, Percent_Identity=28.4457478005865, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790551, Length=306, Percent_Identity=27.7777777777778, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786783, Length=331, Percent_Identity=26.5861027190332, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI145693157, Length=288, Percent_Identity=26.0416666666667, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=342, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1789149, Length=345, Percent_Identity=26.0869565217391, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786912, Length=288, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789403, Length=272, Percent_Identity=30.5147058823529, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790436, Length=257, Percent_Identity=25.6809338521401, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47646; Mature: 47646
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIRFTSHLYVRIWLAVVATVVVLTFLVGAAWRLSADPPQLPIREVLVHNAAGEVIGTAQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCEEECCC TRPDRKLGDDLEFDVLTKDGQSLNLLLPRPKRPPGNPPWMRPPFGFGFGWMLVLVGLAVA CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LGAYPVMRRLTLRLEALQRGVERWGAGDLSARVNADGRDEVAFLAERFNHAAERIETLME HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH SHKSLLANASHELRSPLARIRMGLELMAPTLVASRASGVALPLSSEVGANFPGGGPSENS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCC GAPKYSPALVEEIYRSINELDQLIDEILLASRLDAKQADAEPFETVDLTGLAAEECSRVN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEECCCCCCHHHHHHCC AELQAELGTGLGIAPSGHSLTVQGSPRLLRRLIRNLLENARRYSNGDISLELAQIRVGIR HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH QLAVVRVHDRGPGVPAGQRERIFEPFYRLPGASEREGGVGLGLALVKSISLRHGGSVRCE HEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE ARPGGGASFIVELPAASQRA CCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MWIRFTSHLYVRIWLAVVATVVVLTFLVGAAWRLSADPPQLPIREVLVHNAAGEVIGTAQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCCEEECCC TRPDRKLGDDLEFDVLTKDGQSLNLLLPRPKRPPGNPPWMRPPFGFGFGWMLVLVGLAVA CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LGAYPVMRRLTLRLEALQRGVERWGAGDLSARVNADGRDEVAFLAERFNHAAERIETLME HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH SHKSLLANASHELRSPLARIRMGLELMAPTLVASRASGVALPLSSEVGANFPGGGPSENS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCC GAPKYSPALVEEIYRSINELDQLIDEILLASRLDAKQADAEPFETVDLTGLAAEECSRVN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEECCCCCCHHHHHHCC AELQAELGTGLGIAPSGHSLTVQGSPRLLRRLIRNLLENARRYSNGDISLELAQIRVGIR HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH QLAVVRVHDRGPGVPAGQRERIFEPFYRLPGASEREGGVGLGLALVKSISLRHGGSVRCE HEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE ARPGGGASFIVELPAASQRA CCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]