| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786089
Identifier: 91786089
GI number: 91786089
Start: 193979
End: 194692
Strand: Direct
Name: 91786089
Synonym: Bpro_0178
Alternate gene names: NA
Gene position: 193979-194692 (Clockwise)
Preceding gene: 91786088
Following gene: 91786090
Centisome position: 3.73
GC content: 68.07
Gene sequence:
>714_bases TTGGCCACCGTCCAGAACCATCTGATAGAGCGGCTTCCCCGCAAGGACCGGGTGCGCCTGCTGGCCATTTGCGAACCCGT CCAGCTGGCGCTGTCGGAAGTGTTGTGCGAGCCCGGCACGCCTACGCGCCATGTCTATTTCCCCACCGAGGGCTTTATTT CACTGGTGGCGCTGCTTGACGGCAGCCCCGGCGTGGAAGTGGGCATGGTGGGCCGTGAGGGCATGCTGGGGGCGCAGGTG GCCCTGGGCGTGGTCACCTCGCCATTGCATGCGCTGGTGCAGGGCCCGGGTGCGGCCTGGCGCGTAGACACCGGCGCCTT CCGCAAAGAGCTCGCAGCCAGTGCGGCGCTGCAGCGCGGCCTCAATCGCTACCTCTATGTGCTCATGGCCCAGCAGGCCG CATCGGCTGCGTGCCTGCGCTTTCACCTGATCGGCCCGCGCCTGGCGCGCTGGCTGCTGATGACCCAGGACCGTGCCCAC TCCGACAGCTTTCATGTCACGCAAGCCTTTCTCGCCTACATGCTCGGTGTGCGCCGCGTCGGCGTCACGGCGGCTGCCGG TGCTTTGCAGCGCAGCGGCCTCATCGAATACCACCGCGGCGACTTCAGGGTGCTGGACCGCAGCGGGCTCGAAGCCGCGG CCTGTGGCTGTTATGCCGCTGGGCGGCAGTCCTATGCCGAACTGCTGGACGGCCCATCCCCCGTCGCGCCATAG
Upstream 100 bases:
>100_bases TGGCGCATACTCGGGACATCGACCTACACTGCATCTCGCAGCAGCGCGCCATGTTCGCCCCCGGCATCTGATAGGGCCAG CAGCACACCGGAGAGCCATT
Downstream 100 bases:
>100_bases GGCGTAGGGCCTTCATGCCTCTGGTTCAGGGCCGCTCGGCGGCTCCCTGACAGGGCGGTCGTTGTGATTGCAGGGTTGAG CACCCGGGCTGGCCTGTTCT
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Regulatory Protein Crp; GntR Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MATVQNHLIERLPRKDRVRLLAICEPVQLALSEVLCEPGTPTRHVYFPTEGFISLVALLDGSPGVEVGMVGREGMLGAQV ALGVVTSPLHALVQGPGAAWRVDTGAFRKELAASAALQRGLNRYLYVLMAQQAASAACLRFHLIGPRLARWLLMTQDRAH SDSFHVTQAFLAYMLGVRRVGVTAAAGALQRSGLIEYHRGDFRVLDRSGLEAAACGCYAAGRQSYAELLDGPSPVAP
Sequences:
>Translated_237_residues MATVQNHLIERLPRKDRVRLLAICEPVQLALSEVLCEPGTPTRHVYFPTEGFISLVALLDGSPGVEVGMVGREGMLGAQV ALGVVTSPLHALVQGPGAAWRVDTGAFRKELAASAALQRGLNRYLYVLMAQQAASAACLRFHLIGPRLARWLLMTQDRAH SDSFHVTQAFLAYMLGVRRVGVTAAAGALQRSGLIEYHRGDFRVLDRSGLEAAACGCYAAGRQSYAELLDGPSPVAP >Mature_236_residues ATVQNHLIERLPRKDRVRLLAICEPVQLALSEVLCEPGTPTRHVYFPTEGFISLVALLDGSPGVEVGMVGREGMLGAQVA LGVVTSPLHALVQGPGAAWRVDTGAFRKELAASAALQRGLNRYLYVLMAQQAASAACLRFHLIGPRLARWLLMTQDRAHS DSFHVTQAFLAYMLGVRRVGVTAAAGALQRSGLIEYHRGDFRVLDRSGLEAAACGCYAAGRQSYAELLDGPSPVAP
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25459; Mature: 25328
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVQNHLIERLPRKDRVRLLAICEPVQLALSEVLCEPGTPTRHVYFPTEGFISLVALLD CCCHHHHHHHHCCCHHCEEEEECCCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHC GSPGVEVGMVGREGMLGAQVALGVVTSPLHALVQGPGAAWRVDTGAFRKELAASAALQRG CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH LNRYLYVLMAQQAASAACLRFHLIGPRLARWLLMTQDRAHSDSFHVTQAFLAYMLGVRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GVTAAAGALQRSGLIEYHRGDFRVLDRSGLEAAACGCYAAGRQSYAELLDGPSPVAP HHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ATVQNHLIERLPRKDRVRLLAICEPVQLALSEVLCEPGTPTRHVYFPTEGFISLVALLD CCHHHHHHHHCCCHHCEEEEECCCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHC GSPGVEVGMVGREGMLGAQVALGVVTSPLHALVQGPGAAWRVDTGAFRKELAASAALQRG CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH LNRYLYVLMAQQAASAACLRFHLIGPRLARWLLMTQDRAHSDSFHVTQAFLAYMLGVRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GVTAAAGALQRSGLIEYHRGDFRVLDRSGLEAAACGCYAAGRQSYAELLDGPSPVAP HHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA