| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786088
Identifier: 91786088
GI number: 91786088
Start: 193033
End: 193749
Strand: Direct
Name: 91786088
Synonym: Bpro_0177
Alternate gene names: NA
Gene position: 193033-193749 (Clockwise)
Preceding gene: 91786087
Following gene: 91786089
Centisome position: 3.71
GC content: 63.04
Gene sequence:
>717_bases ATGGCTATTTCCCCCGATCCCCAAAAAAACCAGCTGCTCGCCGCGCTGCCAGATGCCGAGTGGCAGCGCTGGCTGCCACA ACTGGAATTCGTCGATATGCCGCTGGGCCAGGTGCTGTACGAGTCGGGTGGCACATTGAGCCACGTGTATTTTCCAACGA CAGCCATCGTCTCCTTGCTGTATGTGATGGAAAACGGCGCCTCGGCCGAGATTGCCGTCGTGGGCAACGAGGGCGTCGTC GGCATTTCGCTGTTCATGGGCGGCGAGTCCACGCCCAGCCGTGCGGTGGTGCAAAGCGCTGGCCAGGGTTTTCGGCTGAA GGCGCAGTTGATGAAAGACGAGTTTAAAAAAACGCCGGTGCTGCACCTGATGCTGCGCTACACCCAGGCGCTGATCACGC AGATGGCGCAAACCGCGGTGTGCAACCGCCACCATTCGCTGGACCAGCAGCTGTGCCGCTGGCTGCTGCTGAGCCTGGAC CGCCTGCAGGGCAACGAGTTGGTGATGACGCAGGAGTTGATCGCCAACATGCTCGGCGTGCGCCGCGAAGGCGTGACGGA GGGCGCGCTCAAGCTGCAAAAGGCCGGGCTGATCAGCTATGCGCGCGGCCGCATCTCCGTGCTGGACCGCCAGGGGCTGG AGCAGCGCACCTGCGAGTGTTATGCGGTGGTCAAGAAGGAGTACGACCGCCTGCTTCCCCAGCGGCTGGCGGCTTGA
Upstream 100 bases:
>100_bases AACATACAGAAGGGGGTCTGGCTGCATATAGTCCAAGGTTGCAAAAAAAGCCTCTGCCAGAGGTGGTTTTCGAAGTCAGA CCCCGCCCCGGAGTTTCGTG
Downstream 100 bases:
>100_bases CGGCTTGAGGTCTGAGGTCTGAGGCGGGTGCCGGCTTTCGGCCCGGTTCCTGCCGCCTGGCGCTGTGGCCGTGGCCCCGC CCTGGCATCGCGCCGTATGT
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAISPDPQKNQLLAALPDAEWQRWLPQLEFVDMPLGQVLYESGGTLSHVYFPTTAIVSLLYVMENGASAEIAVVGNEGVV GISLFMGGESTPSRAVVQSAGQGFRLKAQLMKDEFKKTPVLHLMLRYTQALITQMAQTAVCNRHHSLDQQLCRWLLLSLD RLQGNELVMTQELIANMLGVRREGVTEGALKLQKAGLISYARGRISVLDRQGLEQRTCECYAVVKKEYDRLLPQRLAA
Sequences:
>Translated_238_residues MAISPDPQKNQLLAALPDAEWQRWLPQLEFVDMPLGQVLYESGGTLSHVYFPTTAIVSLLYVMENGASAEIAVVGNEGVV GISLFMGGESTPSRAVVQSAGQGFRLKAQLMKDEFKKTPVLHLMLRYTQALITQMAQTAVCNRHHSLDQQLCRWLLLSLD RLQGNELVMTQELIANMLGVRREGVTEGALKLQKAGLISYARGRISVLDRQGLEQRTCECYAVVKKEYDRLLPQRLAA >Mature_237_residues AISPDPQKNQLLAALPDAEWQRWLPQLEFVDMPLGQVLYESGGTLSHVYFPTTAIVSLLYVMENGASAEIAVVGNEGVVG ISLFMGGESTPSRAVVQSAGQGFRLKAQLMKDEFKKTPVLHLMLRYTQALITQMAQTAVCNRHHSLDQQLCRWLLLSLDR LQGNELVMTQELIANMLGVRREGVTEGALKLQKAGLISYARGRISVLDRQGLEQRTCECYAVVKKEYDRLLPQRLAA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26457; Mature: 26326
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS51063 HTH_CRP_2 ; PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISPDPQKNQLLAALPDAEWQRWLPQLEFVDMPLGQVLYESGGTLSHVYFPTTAIVSLL CCCCCCCCCCCEEEECCCHHHHHHCCCHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHHH YVMENGASAEIAVVGNEGVVGISLFMGGESTPSRAVVQSAGQGFRLKAQLMKDEFKKTPV HHHHCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCHH LHLMLRYTQALITQMAQTAVCNRHHSLDQQLCRWLLLSLDRLQGNELVMTQELIANMLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH RREGVTEGALKLQKAGLISYARGRISVLDRQGLEQRTCECYAVVKKEYDRLLPQRLAA HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AISPDPQKNQLLAALPDAEWQRWLPQLEFVDMPLGQVLYESGGTLSHVYFPTTAIVSLL CCCCCCCCCCEEEECCCHHHHHHCCCHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHHH YVMENGASAEIAVVGNEGVVGISLFMGGESTPSRAVVQSAGQGFRLKAQLMKDEFKKTPV HHHHCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCHH LHLMLRYTQALITQMAQTAVCNRHHSLDQQLCRWLLLSLDRLQGNELVMTQELIANMLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH RREGVTEGALKLQKAGLISYARGRISVLDRQGLEQRTCECYAVVKKEYDRLLPQRLAA HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA