| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 91786078
GI number: 91786078
Start: 181644
End: 182348
Strand: Reverse
Name: fabG [H]
Synonym: Bpro_0167
Alternate gene names: 91786078
Gene position: 182348-181644 (Counterclockwise)
Preceding gene: 91786079
Following gene: 91786076
Centisome position: 3.51
GC content: 68.09
Gene sequence:
>705_bases ATGAACTTCAAGCATCGCACCGTGATGGTGACCGGCGCCGCAGGCAACCTGGGGCAAGCGGTGGCGGCCGCATTTTCGGC ACAGGGCGCACAACTGGTGCTGCTGGACCGGCAACTCGATGCGCTGCACCGGGCATACGGCACCGCCGGCACCGACCGCC TGCTGGTGGCCACCGACCTGCTGGACGCCGCACAGGTCGCCGCCGCGCAGGCAGCAGCGCTCGCCCGCTTCGGGCGCATC GATGTGCTGTGCAACCTGGCCGGCGGTTTTCGTATGGGCGAGGCGGTGCACGCCACCAGCGACAGCACCTGGGATTTCCT GCTGGACATCAACGCCCGCACGCTGCTGAACATGGCGCGCAGCGTGGTGCCGCACATGCTGGCGCATGGCGGCGGCAAGA TTGTCAACGTTGGGGCTTTTGCGGCGCAAAAAGGCGTGGCCCATATGGGCGCCTACTGCGCCTCCAAGAGCAGCGTCATC CGCCTGACCGAGGCGATGGCTGCCGAGCTGCGCGAGCAACACATCAACGTGAACTGCGTGCTGCCGACCATTCTGGACAC CCCGGAAAATCGCGCGGCCATGCCGGATGCCGACCCCGCGCGCTGGGTCTCGACGCAGGACCTGGCCCAGGTGATCATGT TCCTGGCCTCCGATGCCGCCCGCGCCGTGCATGGCGCCGCCCTCCCCGTGACCGGACTGAGCTGA
Upstream 100 bases:
>100_bases ACCAGCCCGACCACACGCCGGGAACGGTGCTGCCAACAGACCGGATGTTCACCCGCGGATCGGGCCATTACCACCACGCC AAACGGCAGGGAGCAGCAGC
Downstream 100 bases:
>100_bases GCCGCGCCTGAACCTGTCGGCGCGCCGGGCGCTACCGCCAGCTGCGGTGCCGGCGGCTGCCGGGCGCGCAGGGTGCAGGC CGTCACCGACAGGGGCAATG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNFKHRTVMVTGAAGNLGQAVAAAFSAQGAQLVLLDRQLDALHRAYGTAGTDRLLVATDLLDAAQVAAAQAAALARFGRI DVLCNLAGGFRMGEAVHATSDSTWDFLLDINARTLLNMARSVVPHMLAHGGGKIVNVGAFAAQKGVAHMGAYCASKSSVI RLTEAMAAELREQHINVNCVLPTILDTPENRAAMPDADPARWVSTQDLAQVIMFLASDAARAVHGAALPVTGLS
Sequences:
>Translated_234_residues MNFKHRTVMVTGAAGNLGQAVAAAFSAQGAQLVLLDRQLDALHRAYGTAGTDRLLVATDLLDAAQVAAAQAAALARFGRI DVLCNLAGGFRMGEAVHATSDSTWDFLLDINARTLLNMARSVVPHMLAHGGGKIVNVGAFAAQKGVAHMGAYCASKSSVI RLTEAMAAELREQHINVNCVLPTILDTPENRAAMPDADPARWVSTQDLAQVIMFLASDAARAVHGAALPVTGLS >Mature_234_residues MNFKHRTVMVTGAAGNLGQAVAAAFSAQGAQLVLLDRQLDALHRAYGTAGTDRLLVATDLLDAAQVAAAQAAALARFGRI DVLCNLAGGFRMGEAVHATSDSTWDFLLDINARTLLNMARSVVPHMLAHGGGKIVNVGAFAAQKGVAHMGAYCASKSSVI RLTEAMAAELREQHINVNCVLPTILDTPENRAAMPDADPARWVSTQDLAQVIMFLASDAARAVHGAALPVTGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=242, Percent_Identity=30.1652892561983, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=30.2904564315353, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI32483357, Length=241, Percent_Identity=26.5560165975104, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=26.9387755102041, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI7706318, Length=170, Percent_Identity=31.7647058823529, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI31542939, Length=219, Percent_Identity=25.5707762557078, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI126723750, Length=244, Percent_Identity=25.4098360655738, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4504505, Length=228, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI10190704, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20149619, Length=210, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI40254992, Length=213, Percent_Identity=27.2300469483568, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4503817, Length=196, Percent_Identity=30.1020408163265, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=25.609756097561, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=26.5560165975104, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI224922801, Length=186, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4758504, Length=199, Percent_Identity=30.1507537688442, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI157739938, Length=190, Percent_Identity=25.7894736842105, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=26.5193370165746, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=31.4741035856574, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI87082100, Length=241, Percent_Identity=31.9502074688797, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=27.5720164609054, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=29.5546558704453, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1786812, Length=238, Percent_Identity=30.672268907563, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=25.8196721311475, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=28.4518828451883, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=26.3736263736264, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788459, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787526, Length=226, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=28.6885245901639, Blast_Score=93, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=27.1653543307087, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17555706, Length=237, Percent_Identity=29.957805907173, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=24.901185770751, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17559104, Length=241, Percent_Identity=25.7261410788382, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17544670, Length=200, Percent_Identity=26.5, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17563726, Length=252, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=25.6198347107438, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=27.3809523809524, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538480, Length=196, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193203117, Length=209, Percent_Identity=25.3588516746411, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193203115, Length=209, Percent_Identity=25.3588516746411, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=27.9527559055118, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=23.5521235521236, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17551412, Length=196, Percent_Identity=27.0408163265306, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17562908, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562904, Length=249, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=25.531914893617, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560220, Length=246, Percent_Identity=26.0162601626016, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508895, Length=175, Percent_Identity=24.5714285714286, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560332, Length=244, Percent_Identity=25.8196721311475, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=27.8350515463918, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6323882, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=30.1204819277108, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=30.5220883534137, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=29.9595141700405, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=29.2, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=28.75, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=23.8683127572016, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=28.6821705426357, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737361, Length=207, Percent_Identity=29.951690821256, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24643142, Length=232, Percent_Identity=25.8620689655172, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24584748, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076933, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574402, Length=188, Percent_Identity=27.1276595744681, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24584744, Length=188, Percent_Identity=27.1276595744681, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI18859837, Length=195, Percent_Identity=25.1282051282051, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI21358495, Length=189, Percent_Identity=23.2804232804233, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24451; Mature: 24451
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKHRTVMVTGAAGNLGQAVAAAFSAQGAQLVLLDRQLDALHRAYGTAGTDRLLVATDL CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCEEEHHHH LDAAQVAAAQAAALARFGRIDVLCNLAGGFRMGEAVHATSDSTWDFLLDINARTLLNMAR HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHH SVVPHMLAHGGGKIVNVGAFAAQKGVAHMGAYCASKSSVIRLTEAMAAELREQHINVNCV HHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE LPTILDTPENRAAMPDADPARWVSTQDLAQVIMFLASDAARAVHGAALPVTGLS ECHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNFKHRTVMVTGAAGNLGQAVAAAFSAQGAQLVLLDRQLDALHRAYGTAGTDRLLVATDL CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCEEEHHHH LDAAQVAAAQAAALARFGRIDVLCNLAGGFRMGEAVHATSDSTWDFLLDINARTLLNMAR HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHH SVVPHMLAHGGGKIVNVGAFAAQKGVAHMGAYCASKSSVIRLTEAMAAELREQHINVNCV HHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEE LPTILDTPENRAAMPDADPARWVSTQDLAQVIMFLASDAARAVHGAALPVTGLS ECHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]