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The map label for this gene is yfeT [C]

Identifier: 91786053

GI number: 91786053

Start: 149588

End: 150547

Strand: Reverse

Name: yfeT [C]

Synonym: Bpro_0142

Alternate gene names: 91786053

Gene position: 150547-149588 (Counterclockwise)

Preceding gene: 91786054

Following gene: 91786052

Centisome position: 2.89

GC content: 67.08

Gene sequence:

>960_bases
ATGACAACAGTTCCCGGCAACCCCTCGATGGCACAGCGCATTGCACGCGTGTTGCCGACGCTGACACGCTCGCACCGGCA
GATGGCCGACTATGTGCTCGCCCACCCCTTGCAGGCCGCCACCATGCCCATCGACGAGCTGGCCGCCACGCTGGGGGTTT
CGGTGGCCACCGCCAACCGGTTTGCGCGGGCGCTCGAATTTGACGGCTACCAGCAGTTCCGCGCGGCGCTGGTGCTGGGC
TTTGAAACCACGCTGGCCCCGGTCGAGAAGCTGCGCAGCACGCTCGAACACCCCACCACGGTGGCGGACGTGTTCGCGAG
CGCTCTGGCGGAAAACCAGCGCAACATCGATTTGACGCGGCAATCGCTCGATGCCCACAGCTGCGAGCAGGCGGTGGGCG
CCATCCTGAACGCAAAACGCATTTACATCATGGGCTTTGGCGCCAGCAGCTGGCTGGGCGGGCTGTTGCAGCGCAGCCTG
GACCCGTACTGCGACAACGTGCAGTTGCTGGCCAATATTGAGAGTTCCTCCCACGCCGCGCGCGTCCTGACACGCCTGCA
GCCCACAGACCTGCTCATCGCCATTGCCTACCCCCGGTATTTCGCCGACACCGTGTTGCTGACGCGCCGCGCGCGCGAAG
CCGGCGTGCCGGTCCTGGCGCTCACGGATCGTGTGACGTCGCCACTGGCGCCGCTGGCCACGGTGGCGCTTTATGCCCAT
ACCGACAGCCAGTACTTTGCCAACTCCGAGGCCAGCGCACTGGCACTCATCGAAGCGTTAAGCAGCGCTGTCGCCCACAG
CGCCAAGGGCTCGCTCAAGGCGGCGACGCAGCTGGCCGAGTCGGTGCTGCCCTGGCTGCACGGCAGCCACAGCGGCCGGC
TGCGCGCCGTGGCCGAGGCCGCGGCGCCTGCGCCCCGCAAGGCCAACGCCAAATCGAAATCCTCAAAGGCCCCCAAGTGA

Upstream 100 bases:

>100_bases
GCGCATCGCGGGGGTTGGCATCGATTCCAAATGATCAAAAATTTCGCTATCATGAGTCGTTTTGTAAATTTATATACATT
CAACTTCACGCCCGACCCTG

Downstream 100 bases:

>100_bases
CACCCTCCAAGCCCCTGCCCGTCATCGCCATCCACGGTGGCGCCGGCACCATGAGCCGCAACCACATCAGCGCCGAGCAA
ACCGCGGCTTACCACGCTGC

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTTVPGNPSMAQRIARVLPTLTRSHRQMADYVLAHPLQAATMPIDELAATLGVSVATANRFARALEFDGYQQFRAALVLG
FETTLAPVEKLRSTLEHPTTVADVFASALAENQRNIDLTRQSLDAHSCEQAVGAILNAKRIYIMGFGASSWLGGLLQRSL
DPYCDNVQLLANIESSSHAARVLTRLQPTDLLIAIAYPRYFADTVLLTRRAREAGVPVLALTDRVTSPLAPLATVALYAH
TDSQYFANSEASALALIEALSSAVAHSAKGSLKAATQLAESVLPWLHGSHSGRLRAVAEAAAPAPRKANAKSKSSKAPK

Sequences:

>Translated_319_residues
MTTVPGNPSMAQRIARVLPTLTRSHRQMADYVLAHPLQAATMPIDELAATLGVSVATANRFARALEFDGYQQFRAALVLG
FETTLAPVEKLRSTLEHPTTVADVFASALAENQRNIDLTRQSLDAHSCEQAVGAILNAKRIYIMGFGASSWLGGLLQRSL
DPYCDNVQLLANIESSSHAARVLTRLQPTDLLIAIAYPRYFADTVLLTRRAREAGVPVLALTDRVTSPLAPLATVALYAH
TDSQYFANSEASALALIEALSSAVAHSAKGSLKAATQLAESVLPWLHGSHSGRLRAVAEAAAPAPRKANAKSKSSKAPK
>Mature_318_residues
TTVPGNPSMAQRIARVLPTLTRSHRQMADYVLAHPLQAATMPIDELAATLGVSVATANRFARALEFDGYQQFRAALVLGF
ETTLAPVEKLRSTLEHPTTVADVFASALAENQRNIDLTRQSLDAHSCEQAVGAILNAKRIYIMGFGASSWLGGLLQRSLD
PYCDNVQLLANIESSSHAARVLTRLQPTDLLIAIAYPRYFADTVLLTRRAREAGVPVLALTDRVTSPLAPLATVALYAHT
DSQYFANSEASALALIEALSSAVAHSAKGSLKAATQLAESVLPWLHGSHSGRLRAVAEAAAPAPRKANAKSKSSKAPK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=231, Percent_Identity=26.8398268398268, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788159, Length=237, Percent_Identity=27.4261603375527, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34085; Mature: 33954

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVPGNPSMAQRIARVLPTLTRSHRQMADYVLAHPLQAATMPIDELAATLGVSVATANR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH
FARALEFDGYQQFRAALVLGFETTLAPVEKLRSTLEHPTTVADVFASALAENQRNIDLTR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
QSLDAHSCEQAVGAILNAKRIYIMGFGASSWLGGLLQRSLDPYCDNVQLLANIESSSHAA
HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
RVLTRLQPTDLLIAIAYPRYFADTVLLTRRAREAGVPVLALTDRVTSPLAPLATVALYAH
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCHHHHHHHHHHEE
TDSQYFANSEASALALIEALSSAVAHSAKGSLKAATQLAESVLPWLHGSHSGRLRAVAEA
CCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AAPAPRKANAKSKSSKAPK
HCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTVPGNPSMAQRIARVLPTLTRSHRQMADYVLAHPLQAATMPIDELAATLGVSVATANR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH
FARALEFDGYQQFRAALVLGFETTLAPVEKLRSTLEHPTTVADVFASALAENQRNIDLTR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
QSLDAHSCEQAVGAILNAKRIYIMGFGASSWLGGLLQRSLDPYCDNVQLLANIESSSHAA
HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
RVLTRLQPTDLLIAIAYPRYFADTVLLTRRAREAGVPVLALTDRVTSPLAPLATVALYAH
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCHHHHHHHHHHEE
TDSQYFANSEASALALIEALSSAVAHSAKGSLKAATQLAESVLPWLHGSHSGRLRAVAEA
CCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AAPAPRKANAKSKSSKAPK
HCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]