| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lip2 [H]
Identifier: 91786045
GI number: 91786045
Start: 140163
End: 141122
Strand: Direct
Name: lip2 [H]
Synonym: Bpro_0134
Alternate gene names: 91786045
Gene position: 140163-141122 (Clockwise)
Preceding gene: 91786044
Following gene: 91786055
Centisome position: 2.7
GC content: 68.12
Gene sequence:
>960_bases ATGACGACATCTCCTGTTCGCACCACGCTGGACGCTACGCCTCTCGACCCCGCCTTTGCCGGTTTTCTGGCCCAAGCTGC GGCCCAGGGAGCCCCCCCTCTGGAGGCCTTGCCGCCTCCCATTGCGCGGCAGGTCTACCGGGACCTGGCCAACGCCTTGG GCCTGCCCGCCCCGGCCATTGGCAAGGTGGAAGATAAAAGCATTCCCGGCCCCGGTGGCGTGCTGCCTTTGCGGGCATAC AGTCCCACGACTCAGGGGCCGTGGCCCGTGCTGTTGTACGTGCATGGAGGAGGTTTTGTGATGGGCGATCTGCAAACGCA TGACGAGGTCTGCCGCACCCTGTGCCACCTTACGGGCATGCTGGTCGTGGCGGTGGACTACCGGCTGGCTCCCGAGCATC CGTTCCCGGCCGCCCCTGATGATGCGGAAGCGGCCTTGCGCTGGATCTGCGTCCATGCGGACACCCTGGGTGGTGACCCG CATCGCATCGCCGTGGCGGGCGACAGCGCCGGGGCACAGCTGGCCCTGGTGGCGGTGCGGCGGGTGCAGTCCCCCGCGGT GCGAGCCCTGGGCCTGATTTACCCCGTGGCGCAGCACCCGGACGAGCCCAGTCCGTCGTACCAGGAAAATGAAGGCAAGT TCCTCACCAAGGGGGTCATGCAGTGGTTCACCGCCAGCTATCTGGGCGGGCCATCACCCACGCCGCCGGATCATCCCGAT GTGGCGCTGCTGAAGTCCGAGCTGGCGGCGCTGCCCGCCACCTGGGTCGCCACCATGGGCCATGACCCGCTGCGTGACGA AGGCCATGCGCTGGCCCTGCGTGCCGAGGCCGCAGGCGTTTTGGTCGCGCACCAGCACTACCCCAGCGCCATCCACGCCT GCATCCATTTCAGCGCCGTGTCCCCCATTGGCCCGCAGGTGCTGGCGGACTTGGCGCAGTGGTTGCGCGAGCAGGCTTGA
Upstream 100 bases:
>100_bases TGGTGCTGCTGCCTGCGTTGGGGCACTTTTTGCTGCGCAAACCAGTGGTGGCGGTGGTTGCGCCAGCCGCGATTTCTGTA TCAATCTAATCTTTAAATCC
Downstream 100 bases:
>100_bases TGTGCCAGGCCGACTGGCGTGGTCTGTGATGCGCTAGCGCAGCAGGGTTGACATGGCCGACAGGCAGTTGACCATGCGCA CCGCAGCCTCCACCGTCGGT
Product: alpha/beta hydrolase fold-3 protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTTSPVRTTLDATPLDPAFAGFLAQAAAQGAPPLEALPPPIARQVYRDLANALGLPAPAIGKVEDKSIPGPGGVLPLRAY SPTTQGPWPVLLYVHGGGFVMGDLQTHDEVCRTLCHLTGMLVVAVDYRLAPEHPFPAAPDDAEAALRWICVHADTLGGDP HRIAVAGDSAGAQLALVAVRRVQSPAVRALGLIYPVAQHPDEPSPSYQENEGKFLTKGVMQWFTASYLGGPSPTPPDHPD VALLKSELAALPATWVATMGHDPLRDEGHALALRAEAAGVLVAHQHYPSAIHACIHFSAVSPIGPQVLADLAQWLREQA
Sequences:
>Translated_319_residues MTTSPVRTTLDATPLDPAFAGFLAQAAAQGAPPLEALPPPIARQVYRDLANALGLPAPAIGKVEDKSIPGPGGVLPLRAY SPTTQGPWPVLLYVHGGGFVMGDLQTHDEVCRTLCHLTGMLVVAVDYRLAPEHPFPAAPDDAEAALRWICVHADTLGGDP HRIAVAGDSAGAQLALVAVRRVQSPAVRALGLIYPVAQHPDEPSPSYQENEGKFLTKGVMQWFTASYLGGPSPTPPDHPD VALLKSELAALPATWVATMGHDPLRDEGHALALRAEAAGVLVAHQHYPSAIHACIHFSAVSPIGPQVLADLAQWLREQA >Mature_318_residues TTSPVRTTLDATPLDPAFAGFLAQAAAQGAPPLEALPPPIARQVYRDLANALGLPAPAIGKVEDKSIPGPGGVLPLRAYS PTTQGPWPVLLYVHGGGFVMGDLQTHDEVCRTLCHLTGMLVVAVDYRLAPEHPFPAAPDDAEAALRWICVHADTLGGDPH RIAVAGDSAGAQLALVAVRRVQSPAVRALGLIYPVAQHPDEPSPSYQENEGKFLTKGVMQWFTASYLGGPSPTPPDHPDV ALLKSELAALPATWVATMGHDPLRDEGHALALRAEAAGVLVAHQHYPSAIHACIHFSAVSPIGPQVLADLAQWLREQA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=313, Percent_Identity=29.7124600638978, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI68299767, Length=293, Percent_Identity=27.3037542662116, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI157041239, Length=146, Percent_Identity=37.6712328767123, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI68051721, Length=300, Percent_Identity=25.3333333333333, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI226423947, Length=308, Percent_Identity=24.6753246753247, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI61966717, Length=288, Percent_Identity=25, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI21328446, Length=99, Percent_Identity=35.3535353535354, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI157041237, Length=278, Percent_Identity=24.8201438848921, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1786682, Length=263, Percent_Identity=29.277566539924, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17567059, Length=264, Percent_Identity=28.7878787878788, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540028, Length=174, Percent_Identity=29.8850574712644, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71996133, Length=167, Percent_Identity=31.1377245508982, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72001146, Length=177, Percent_Identity=31.0734463276836, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24656084, Length=99, Percent_Identity=35.3535353535354, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656076, Length=99, Percent_Identity=35.3535353535354, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI20130169, Length=99, Percent_Identity=35.3535353535354, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 33598; Mature: 33466
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS01173 LIPASE_GDXG_HIS ; PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPVRTTLDATPLDPAFAGFLAQAAAQGAPPLEALPPPIARQVYRDLANALGLPAPAI CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC GKVEDKSIPGPGGVLPLRAYSPTTQGPWPVLLYVHGGGFVMGDLQTHDEVCRTLCHLTGM CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHH LVVAVDYRLAPEHPFPAAPDDAEAALRWICVHADTLGGDPHRIAVAGDSAGAQLALVAVR HHHEEECEECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHHHHH RVQSPAVRALGLIYPVAQHPDEPSPSYQENEGKFLTKGVMQWFTASYLGGPSPTPPDHPD HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC VALLKSELAALPATWVATMGHDPLRDEGHALALRAEAAGVLVAHQHYPSAIHACIHFSAV HHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCC SPIGPQVLADLAQWLREQA CCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TTSPVRTTLDATPLDPAFAGFLAQAAAQGAPPLEALPPPIARQVYRDLANALGLPAPAI CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC GKVEDKSIPGPGGVLPLRAYSPTTQGPWPVLLYVHGGGFVMGDLQTHDEVCRTLCHLTGM CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHH LVVAVDYRLAPEHPFPAAPDDAEAALRWICVHADTLGGDPHRIAVAGDSAGAQLALVAVR HHHEEECEECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHHHHH RVQSPAVRALGLIYPVAQHPDEPSPSYQENEGKFLTKGVMQWFTASYLGGPSPTPPDHPD HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC VALLKSELAALPATWVATMGHDPLRDEGHALALRAEAAGVLVAHQHYPSAIHACIHFSAV HHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCC SPIGPQVLADLAQWLREQA CCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]