Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786036

Identifier: 91786036

GI number: 91786036

Start: 127446

End: 128420

Strand: Direct

Name: 91786036

Synonym: Bpro_0125

Alternate gene names: NA

Gene position: 127446-128420 (Clockwise)

Preceding gene: 91786035

Following gene: 91786039

Centisome position: 2.45

GC content: 67.79

Gene sequence:

>975_bases
GTGAGCGGCGGTCCCATCAAGGCCCATGCGGTGCAACTGGAGCCGCCCGGGCTGTCCGGCTGGGCGGCTTCTCCCACAGG
TACGGCCTATGTGCACGAGCGTGCCTCGGTCGAGGCCGGCCCGGAAGTCCTGCTGACGGCGCTGGTGCACGGCAACGAGT
ACTCGGGTGCGTGGGCGCTGGATGCGTTCCTGCGCAGCGGACTGCACCCCCGGCGGGGGCGTATCACTGCTGCGTTCTGC
AACACGGCGGCCTTCGCACGCTTTGAGGCCCGCCATCCGGACGCATCCCGGTTTGTCGACGAGGACTTCAACCGCGTGTG
GTCCGCAAGCGTGCTGGATGGCAGCAGACACAGCGCCGAATTGTCACGTGCCCGCGAAATCCGACCCTTCGTCGACCGCG
CCAGCCATTTGCTGGACCTGCATTCGATGCATGAGCCCTGCGGGCCTCTTCTGGTCACCGGCCTGCTGCCACGCAACATC
GCTTTCGCGCAAAGCCTGGGTACGGCGAGCCAGGTGGTCGTGGATGCCGGTCACGCCGATGGCGTGCGCATGCGGGACTA
CGGGCCGTTTGCGGAAAAAGAGGGCTCCCGCATTGCCCTGCTGCTGGAAGCCGGGCAGCACTGGGAGCTGGCGTCGCTGC
AGGCGGCGCGCAATGTGCTGATGCGTTTTCTGGTGGGCTGCGGGGTCATGGATCATGGCGACGTGCCGCCTGGCTGGCTG
CTGCCCGACGCGATGCCGCCACCGCCGGTGATGGTCACCCACCGCATCGTCGCGCGCTCGGCCGATTTTGCGTTTGTGCA
GGACTTTCGTGGCGGCGAAATCATTCGCCGCGCCGGCACACCGATTGCGCACGATGCCGGCGAGGCGGTGGTGACGCCTT
ATGACGACTGCGTGCTGGTCATGCCATCGGTGCGGCAGTTGCGGCCCGGTGTGACCACCGTGCGCCTGGGGCAGCGGGGC
GACGGGATGGTGTAG

Upstream 100 bases:

>100_bases
ACGAAGGAGGCACGCCGCAGGCGCTCACGGCCTTTATCCGGGCGGAAACCCAGCGCGTGCGCAGTGTGGTCAACAAGGCC
GTGGCGACCGGCGCGGCCTC

Downstream 100 bases:

>100_bases
CGGGGGCGGCCAGGTCGCGTAGAACCCGGATGGATACTTCAGTCACGGACAGTCGTCGCGCCCTGCGCCTGTCGGCCAGG
CAAGGCGCGCCGGATTCACC

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Succinylglutamate Desuccinylase/Aspartoacylase Family; Aspartoacylase

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFC
NTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNI
AFAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL
LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRG
DGMV

Sequences:

>Translated_324_residues
MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFC
NTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNI
AFAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL
LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRG
DGMV
>Mature_323_residues
SGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWALDAFLRSGLHPRRGRITAAFCN
TAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAELSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIA
FAQSLGTASQVVVDAGHADGVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWLL
PDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLVMPSVRQLRPGVTTVRLGQRGD
GMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34921; Mature: 34790

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWAL
CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEHHHCCCCCCCHHHH
DAFLRSGLHPRRGRITAAFCNTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAE
HHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIAFAQSLGTASQVVVDAGHAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC
GVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL
CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLV
CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCCCEEEE
MPSVRQLRPGVTTVRLGQRGDGMV
CCCHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SGGPIKAHAVQLEPPGLSGWAASPTGTAYVHERASVEAGPEVLLTALVHGNEYSGAWAL
CCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEHHHCCCCCCCHHHH
DAFLRSGLHPRRGRITAAFCNTAAFARFEARHPDASRFVDEDFNRVWSASVLDGSRHSAE
HHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LSRAREIRPFVDRASHLLDLHSMHEPCGPLLVTGLLPRNIAFAQSLGTASQVVVDAGHAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC
GVRMRDYGPFAEKEGSRIALLLEAGQHWELASLQAARNVLMRFLVGCGVMDHGDVPPGWL
CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPDAMPPPPVMVTHRIVARSADFAFVQDFRGGEIIRRAGTPIAHDAGEAVVTPYDDCVLV
CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCCCEEEE
MPSVRQLRPGVTTVRLGQRGDGMV
CCCHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA