| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786033
Identifier: 91786033
GI number: 91786033
Start: 124466
End: 125365
Strand: Reverse
Name: 91786033
Synonym: Bpro_0122
Alternate gene names: NA
Gene position: 125365-124466 (Counterclockwise)
Preceding gene: 91786037
Following gene: 91786030
Centisome position: 2.41
GC content: 66.11
Gene sequence:
>900_bases ATGACCGCACGCAAGACCCACCTCGACACCCTCGCTGTCTCCCTGCTGCTGGGTTGCTGCCTGTTCTGGGGCCTGCAGCA GGTGCTGATCAAGGCCACCATCAGCGAGATCCCGCCGATGTTCCAGGCCTCCTTGCGTTTGCTGGGCGCCACGGCCCTGC TGGGGCTGTGGTGCCTGTGGCGCGGCATTGCGCTGTTTGGCCGTGACGGCTCCCTGCGGGCCGGCCTGCTGGCAGGTGCG CTGTTTGGCGCGGAGTTTGCCTGCATTTACCTGGGCCTGCAGTACACCAGCGCCTCGCGCCTGACGGTGTTTTTGTACAC CTCGCCTTTCTGGGTCGCCCTGCTGGTGCCGCTGTGGGTCAAGGCCGAACGCTTGCGCGGCCTGCAATGGGTTGGCTTGC TCGGGGCCTTTGTCGCCGTGGTGTTTGCCCTGCGTGAAGGCTTCACGGCCGGCCACGGATCAACGGCGCGCGGTGACTTG CTGGCGCTGCTGGCCGGGCTGCTCTGGGGACTCACCACCGTGGTCATTCGCGCCTCCAGCCTGACCAACATCGCGGCGGA AAAACTGCTCTTTTACCAACTGGCCGTCAGCGGCCTGGCCTTCCCGGCGCTGTCACTGGCGCTGGGCGAGGTGTGGGTCT GGCAATTCAGCCCGTTTGCCATCACCTCGCTGCTGCTGCAGACCGTGATCGGCGCTTTCGCCAGTTACCTGGCCTGGATG TGGATGCTGGGGCACTACCCGGCGACCCGGATTTCAGTGTTTGTCTTTCTCACGCCGCTGTTTGCGCTGCTGTTTGGCGC GCTGTGGCTCAGGGAAAGTGTGACGCCCGGCCTGCTGGCGGCGCTGGCGCTGGTGGCCGTCGGTGTCGTGCTGGTGAATC GTCAGCCGGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CATTTATGGTCCACAGCAACACCCTGTCCTGTCAGTTCATGTGATGGTATTCCTTGTCACCCACCGCCGGGCCGCGGGGA GCCCCGGCTACCATCAAGGC
Downstream 100 bases:
>100_bases GCGTTTCAGGGTTTCAGGGTTTGGACACCATGTGCAGCACCATGTCGACACGGTTGCCATGGCCTTGCGTGAGCACCAGG TGCAGCTTGTCGTTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTARKTHLDTLAVSLLLGCCLFWGLQQVLIKATISEIPPMFQASLRLLGATALLGLWCLWRGIALFGRDGSLRAGLLAGA LFGAEFACIYLGLQYTSASRLTVFLYTSPFWVALLVPLWVKAERLRGLQWVGLLGAFVAVVFALREGFTAGHGSTARGDL LALLAGLLWGLTTVVIRASSLTNIAAEKLLFYQLAVSGLAFPALSLALGEVWVWQFSPFAITSLLLQTVIGAFASYLAWM WMLGHYPATRISVFVFLTPLFALLFGALWLRESVTPGLLAALALVAVGVVLVNRQPAAA
Sequences:
>Translated_299_residues MTARKTHLDTLAVSLLLGCCLFWGLQQVLIKATISEIPPMFQASLRLLGATALLGLWCLWRGIALFGRDGSLRAGLLAGA LFGAEFACIYLGLQYTSASRLTVFLYTSPFWVALLVPLWVKAERLRGLQWVGLLGAFVAVVFALREGFTAGHGSTARGDL LALLAGLLWGLTTVVIRASSLTNIAAEKLLFYQLAVSGLAFPALSLALGEVWVWQFSPFAITSLLLQTVIGAFASYLAWM WMLGHYPATRISVFVFLTPLFALLFGALWLRESVTPGLLAALALVAVGVVLVNRQPAAA >Mature_298_residues TARKTHLDTLAVSLLLGCCLFWGLQQVLIKATISEIPPMFQASLRLLGATALLGLWCLWRGIALFGRDGSLRAGLLAGAL FGAEFACIYLGLQYTSASRLTVFLYTSPFWVALLVPLWVKAERLRGLQWVGLLGAFVAVVFALREGFTAGHGSTARGDLL ALLAGLLWGLTTVVIRASSLTNIAAEKLLFYQLAVSGLAFPALSLALGEVWVWQFSPFAITSLLLQTVIGAFASYLAWMW MLGHYPATRISVFVFLTPLFALLFGALWLRESVTPGLLAALALVAVGVVLVNRQPAAA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32215; Mature: 32084
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARKTHLDTLAVSLLLGCCLFWGLQQVLIKATISEIPPMFQASLRLLGATALLGLWCLW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RGIALFGRDGSLRAGLLAGALFGAEFACIYLGLQYTSASRLTVFLYTSPFWVALLVPLWV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH KAERLRGLQWVGLLGAFVAVVFALREGFTAGHGSTARGDLLALLAGLLWGLTTVVIRASS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LTNIAAEKLLFYQLAVSGLAFPALSLALGEVWVWQFSPFAITSLLLQTVIGAFASYLAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH WMLGHYPATRISVFVFLTPLFALLFGALWLRESVTPGLLAALALVAVGVVLVNRQPAAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TARKTHLDTLAVSLLLGCCLFWGLQQVLIKATISEIPPMFQASLRLLGATALLGLWCLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RGIALFGRDGSLRAGLLAGALFGAEFACIYLGLQYTSASRLTVFLYTSPFWVALLVPLWV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH KAERLRGLQWVGLLGAFVAVVFALREGFTAGHGSTARGDLLALLAGLLWGLTTVVIRASS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LTNIAAEKLLFYQLAVSGLAFPALSLALGEVWVWQFSPFAITSLLLQTVIGAFASYLAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH WMLGHYPATRISVFVFLTPLFALLFGALWLRESVTPGLLAALALVAVGVVLVNRQPAAA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]