Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786030

Identifier: 91786030

GI number: 91786030

Start: 121214

End: 121816

Strand: Reverse

Name: 91786030

Synonym: Bpro_0119

Alternate gene names: NA

Gene position: 121816-121214 (Counterclockwise)

Preceding gene: 91786033

Following gene: 91786029

Centisome position: 2.34

GC content: 64.34

Gene sequence:

>603_bases
ATGGACGCCAAAACCCAGAAAAGCGAGATGACCCGGACCGCCATCATTGGCGCGGGAATTGATCTCGCAGCGGCGGAAGG
CCTGGAGGCCATCACGCTGCAGGCCGTGGCCGACCGGATCGGCCTGTCCAAGAGCGGCGTGTTCTCGCGCATCGGCTCGC
GCGAGGCTTTGCAAAAAGCCGTCATTGAAGAGTTTGGCCGGCGCTTTCTGGCCGATGTGTTTGTACCGGCCATGCAGCAG
CCCAAAGGCCTGCCACGCCTCAACGAAATCGTGCGCCGCTGGATTGTGCGCACGCGCGACGTCGAAGTGCAGCAGGGATG
CATCTACACGGCCGGCGCGTTCGAGCTGGACGACAAGGAGGGCGAGTTGCGCAACACGCTGCTGCAGGAAGTGACGCGCT
GGCGCGCCGCCTTGCGCCGTACCGTGTTGCAGGCCATCGAGGCCGGCCACCTGCAACCAGACACCGACCCCGAGCAGCTG
GTCAGCGAAATCAGCAGCTTGTCCATTGGGCTGTTGCACGATGCGCGCTTTCTGCGCGACCCGCGCGCGGCCGAGCGCAC
CCAGGCATCCTGGGAGCGCCTGATTAACAGCTACAAAACCTGA

Upstream 100 bases:

>100_bases
TGGTGCAAGCTTAACGCCACGACCTTGACGTGAGAAGGGTCAGCACGCCTCATGAAGTGCGTGATTTGCAATTTCGCACA
ATCGTGCTAATATTCGCCGC

Downstream 100 bases:

>100_bases
TTGTTGAGGGACGCCCACGTGCCCTTGTTTGTTGTGTTTGCTCTAATTTCGCACGACCGTGCGAAGAAAGGAAGATGCCA
TGTTGATCATCATTTTTTCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcription Regulator Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDAKTQKSEMTRTAIIGAGIDLAAAEGLEAITLQAVADRIGLSKSGVFSRIGSREALQKAVIEEFGRRFLADVFVPAMQQ
PKGLPRLNEIVRRWIVRTRDVEVQQGCIYTAGAFELDDKEGELRNTLLQEVTRWRAALRRTVLQAIEAGHLQPDTDPEQL
VSEISSLSIGLLHDARFLRDPRAAERTQASWERLINSYKT

Sequences:

>Translated_200_residues
MDAKTQKSEMTRTAIIGAGIDLAAAEGLEAITLQAVADRIGLSKSGVFSRIGSREALQKAVIEEFGRRFLADVFVPAMQQ
PKGLPRLNEIVRRWIVRTRDVEVQQGCIYTAGAFELDDKEGELRNTLLQEVTRWRAALRRTVLQAIEAGHLQPDTDPEQL
VSEISSLSIGLLHDARFLRDPRAAERTQASWERLINSYKT
>Mature_200_residues
MDAKTQKSEMTRTAIIGAGIDLAAAEGLEAITLQAVADRIGLSKSGVFSRIGSREALQKAVIEEFGRRFLADVFVPAMQQ
PKGLPRLNEIVRRWIVRTRDVEVQQGCIYTAGAFELDDKEGELRNTLLQEVTRWRAALRRTVLQAIEAGHLQPDTDPEQL
VSEISSLSIGLLHDARFLRDPRAAERTQASWERLINSYKT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22356; Mature: 22356

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKTQKSEMTRTAIIGAGIDLAAAEGLEAITLQAVADRIGLSKSGVFSRIGSREALQKA
CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
VIEEFGRRFLADVFVPAMQQPKGLPRLNEIVRRWIVRTRDVEVQQGCIYTAGAFELDDKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCC
GELRNTLLQEVTRWRAALRRTVLQAIEAGHLQPDTDPEQLVSEISSLSIGLLHDARFLRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PRAAERTQASWERLINSYKT
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAKTQKSEMTRTAIIGAGIDLAAAEGLEAITLQAVADRIGLSKSGVFSRIGSREALQKA
CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
VIEEFGRRFLADVFVPAMQQPKGLPRLNEIVRRWIVRTRDVEVQQGCIYTAGAFELDDKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCC
GELRNTLLQEVTRWRAALRRTVLQAIEAGHLQPDTDPEQLVSEISSLSIGLLHDARFLRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PRAAERTQASWERLINSYKT
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA