Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786019

Identifier: 91786019

GI number: 91786019

Start: 109745

End: 110344

Strand: Reverse

Name: 91786019

Synonym: Bpro_0107

Alternate gene names: NA

Gene position: 110344-109745 (Counterclockwise)

Preceding gene: 91786020

Following gene: 91786018

Centisome position: 2.12

GC content: 65.17

Gene sequence:

>600_bases
ATGATGCTCATCATGCAAAATAGGAAGCCTAACGCCAGAGCTGCGGCTAAGGATGCCACGCACGAACGCATCGTGGCCGT
GGCCGCCCGAGCAATCCGTCGTAGCGGCTACGACGGTACTGGAGTCGCCGACATCATGAAGGAGGCCGGCCTGACGCATG
GCGCCTTTTATGCCCACTTCACGTCACGCGAGGCCATGTTGGCCGAAGCGGCGGGGAGGGCGTGCGCGGAGTCAGCCGCC
GTAGTGGCGGAGGTTGTTGCCAGCGTGCCCTCCGAGCAGGCTTTTGCATCCATGCTTCGCACTTACCTCTCGCGGGAGCA
CCTGGAGCAGGTAGAAATGGGATGTCCCCTGGCCGCGCTGGGCTCGGAGACGCCGCGCCAGGCCCCCGAAGTACGCCGAG
TGACCACCCGGCACATCAAGGAAATGATCGATCTTGTCGCCCGTCAGTCGCCTGACTGGGGGCAGCCCGGTGCCCACGAA
CGCGCACTCGTGACCGTCGCCACCATGGTGGGCACATTGCTGTTAGCGCGTGCAGTCGACGAGCCCGCGCTATCGGACAG
CCTGTGCGCGGCCGCATTGAAGCACCTGCCCCCCGCCTGA

Upstream 100 bases:

>100_bases
TTGAACACTTGCGCATAGGTCGTGGCCGTGGTCGGGATGGATCCCCGGTGATCGACCTTGCCCCAAAAACGCCGCAGTGC
GCACTGCTGGAAATTATTGT

Downstream 100 bases:

>100_bases
ATCCACTGAGACACTCGCCTTTTCGCTCGCCTAAACATATGATGATCATCATGCGAAATCAATATAACGCCTGTCAGGCG
AGCCCTTCTGTTCGGCAATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Regulatory Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA
VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE
RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA

Sequences:

>Translated_199_residues
MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA
VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE
RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA
>Mature_199_residues
MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHFTSREAMLAEAAGRACAESAA
VVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAALGSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHE
RALVTVATMVGTLLLARAVDEPALSDSLCAAALKHLPPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21251; Mature: 21251

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHF
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHH
TSREAMLAEAAGRACAESAAVVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHERALVTVATMVGTLLLARAVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
EPALSDSLCAAALKHLPPA
CCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMLIMQNRKPNARAAAKDATHERIVAVAARAIRRSGYDGTGVADIMKEAGLTHGAFYAHF
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHH
TSREAMLAEAAGRACAESAAVVAEVVASVPSEQAFASMLRTYLSREHLEQVEMGCPLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GSETPRQAPEVRRVTTRHIKEMIDLVARQSPDWGQPGAHERALVTVATMVGTLLLARAVD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
EPALSDSLCAAALKHLPPA
CCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA