| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785994
Identifier: 91785994
GI number: 91785994
Start: 84470
End: 85696
Strand: Direct
Name: 91785994
Synonym: Bpro_0081
Alternate gene names: NA
Gene position: 84470-85696 (Clockwise)
Preceding gene: 91785993
Following gene: 91785995
Centisome position: 1.62
GC content: 73.27
Gene sequence:
>1227_bases ATGGTCATGGATTCCCTGATTACCGCCTCCGCGCGTGCGCTTGCCGCCGGCGACGCGCTCGGCGCCCTCAAGCGCGTCGC CCTGCGCGACGACCCGCCGGCGCTGGCCCTGCGCGGCATCGCCATGGCCCAGCTTGGCGAGCACCCGCGCGCCCGCGAAC TCCTTCGGCGCGCTGCCCGCGGCTTTGGTGCCCATGAAGAACTGGCGCGTGCGCGCTGCGTGGTGGCAGAGGCCGAGGTG GCGATGGCCATGCGCGACTTCGCCGGCTCGCCACGTGCACTGGCGGCAGCGGCGGCCACACTGCAAGCGCATGCCGACAG TGCCAACGCACTGCAGGCGTGGCTGATCACGGCACGCCGGCTGTTGCTGCTGGGCCGGCTGGATGAAGCGGCGGCCGCGC TGGCCCATCTGGACGCGCGCGGCCTGCCGCCCTCGCTGCGGGCCGTGGCTGAACTGACTGCTGCCGAGCTTGCGCTGCGG TCGCTGCGCGTCGGGGAGGCGCGGATGGCGCTGGCGCGTGCGCACGCGGCGGCCGAACGTGCACAGGTGCCGGCGCTGAT GGCCGAAGTCACTGAAGCGCGCGCTGCGCTCGACAGGCCCGCCGCCCGGCGCCTTGCCGCCAGCGGTGAACAGGCGCTGC GCCTCGATGAGGTCTCAGCGCTCCTGGCCTCGGACGCGCTGGTGGTCGATGCCTGCCGCCGCGGGCTGGGCGCCGGCGAC CAGTGGCGGCCGCTGGCGCGCCGGCCAGTCCTGTTCTCACTGGCTCGCTCGCTCGCCGAAGCATGGCCTGGCGATGTTAG CCGCGAAGCCTTGATCGAATCCGCCTTTCGCACCAAACGTCCTGACGAGACGCACAGGGCACGCCTGAGGGTGGAGATCG GGCGCCTGCGCGCGCTGGTCAAACCGCTCGCGGCCATTGAGGCGACCGAGCGGGGCTTCATCCTCAAGCCACTGGCCGGG CGCGATGTCGCTGTGCTGGCGCCGCCCATTGACGGCGAGCAAGCGTCGCTGGTGGCGCTGCTCTCCGACGGCGCGGCCTG GTCCACCTCCGCCCTGGCGCTGGCCTTGGGGGCGAGCCAGCGTACCGTGCAGCGGGCGCTGGCCGACCTTGAAGCCGACG GGCGGGTGCGCTCCATCGGGCGGGCGCGGGCGCAGCGCTGGCTGGCGCCGCCGCTGGCGGGATTCACGACGATCTTGTTA CTCCCCGCTGCGCTGCCGATTGGATAG
Upstream 100 bases:
>100_bases GCCGGGGCTGCATCTTCAACGCCGAAACCATCCCTGGCCGCGCACGCCAGCGCCCGGAAAGTTGCAAGCGCGGCGCTGCA TCGGCAGGGCGGTGTAGCCT
Downstream 100 bases:
>100_bases AGTTGTCTTTAGACCGTGAACAGGTTCTCAGGCGCCGACGGACGGTGCAACACAAGGAGCAACGATGACCCGCAAGACCC TCAACGACAAACCCGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MVMDSLITASARALAAGDALGALKRVALRDDPPALALRGIAMAQLGEHPRARELLRRAARGFGAHEELARARCVVAEAEV AMAMRDFAGSPRALAAAAATLQAHADSANALQAWLITARRLLLLGRLDEAAAALAHLDARGLPPSLRAVAELTAAELALR SLRVGEARMALARAHAAAERAQVPALMAEVTEARAALDRPAARRLAASGEQALRLDEVSALLASDALVVDACRRGLGAGD QWRPLARRPVLFSLARSLAEAWPGDVSREALIESAFRTKRPDETHRARLRVEIGRLRALVKPLAAIEATERGFILKPLAG RDVAVLAPPIDGEQASLVALLSDGAAWSTSALALALGASQRTVQRALADLEADGRVRSIGRARAQRWLAPPLAGFTTILL LPAALPIG
Sequences:
>Translated_408_residues MVMDSLITASARALAAGDALGALKRVALRDDPPALALRGIAMAQLGEHPRARELLRRAARGFGAHEELARARCVVAEAEV AMAMRDFAGSPRALAAAAATLQAHADSANALQAWLITARRLLLLGRLDEAAAALAHLDARGLPPSLRAVAELTAAELALR SLRVGEARMALARAHAAAERAQVPALMAEVTEARAALDRPAARRLAASGEQALRLDEVSALLASDALVVDACRRGLGAGD QWRPLARRPVLFSLARSLAEAWPGDVSREALIESAFRTKRPDETHRARLRVEIGRLRALVKPLAAIEATERGFILKPLAG RDVAVLAPPIDGEQASLVALLSDGAAWSTSALALALGASQRTVQRALADLEADGRVRSIGRARAQRWLAPPLAGFTTILL LPAALPIG >Mature_408_residues MVMDSLITASARALAAGDALGALKRVALRDDPPALALRGIAMAQLGEHPRARELLRRAARGFGAHEELARARCVVAEAEV AMAMRDFAGSPRALAAAAATLQAHADSANALQAWLITARRLLLLGRLDEAAAALAHLDARGLPPSLRAVAELTAAELALR SLRVGEARMALARAHAAAERAQVPALMAEVTEARAALDRPAARRLAASGEQALRLDEVSALLASDALVVDACRRGLGAGD QWRPLARRPVLFSLARSLAEAWPGDVSREALIESAFRTKRPDETHRARLRVEIGRLRALVKPLAAIEATERGFILKPLAG RDVAVLAPPIDGEQASLVALLSDGAAWSTSALALALGASQRTVQRALADLEADGRVRSIGRARAQRWLAPPLAGFTTILL LPAALPIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42967; Mature: 42967
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMDSLITASARALAAGDALGALKRVALRDDPPALALRGIAMAQLGEHPRARELLRRAAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH GFGAHEELARARCVVAEAEVAMAMRDFAGSPRALAAAAATLQAHADSANALQAWLITARR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLLLGRLDEAAAALAHLDARGLPPSLRAVAELTAAELALRSLRVGEARMALARAHAAAER HHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AQVPALMAEVTEARAALDRPAARRLAASGEQALRLDEVSALLASDALVVDACRRGLGAGD HHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWRPLARRPVLFSLARSLAEAWPGDVSREALIESAFRTKRPDETHRARLRVEIGRLRALV CCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KPLAAIEATERGFILKPLAGRDVAVLAPPIDGEQASLVALLSDGAAWSTSALALALGASQ HHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHEEEEECCCCCCHHHHHHHHHCCHH RTVQRALADLEADGRVRSIGRARAQRWLAPPLAGFTTILLLPAALPIG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVMDSLITASARALAAGDALGALKRVALRDDPPALALRGIAMAQLGEHPRARELLRRAAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH GFGAHEELARARCVVAEAEVAMAMRDFAGSPRALAAAAATLQAHADSANALQAWLITARR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLLLGRLDEAAAALAHLDARGLPPSLRAVAELTAAELALRSLRVGEARMALARAHAAAER HHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AQVPALMAEVTEARAALDRPAARRLAASGEQALRLDEVSALLASDALVVDACRRGLGAGD HHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWRPLARRPVLFSLARSLAEAWPGDVSREALIESAFRTKRPDETHRARLRVEIGRLRALV CCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KPLAAIEATERGFILKPLAGRDVAVLAPPIDGEQASLVALLSDGAAWSTSALALALGASQ HHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHEEEEECCCCCCHHHHHHHHHCCHH RTVQRALADLEADGRVRSIGRARAQRWLAPPLAGFTTILLLPAALPIG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA