| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is psuG [H]
Identifier: 91785993
GI number: 91785993
Start: 83292
End: 84251
Strand: Direct
Name: psuG [H]
Synonym: Bpro_0080
Alternate gene names: 91785993
Gene position: 83292-84251 (Clockwise)
Preceding gene: 91785992
Following gene: 91785994
Centisome position: 1.6
GC content: 69.9
Gene sequence:
>960_bases ATGGTTACCAACCTTGCCCACTCCTGGTTGATCCGCAGCGCACCTGTGGTGGCTGCACAGGCCGCCGGCCGCCCGCTCGT GGCGCTGGAATCGACCATCATCGCTCACGGCATGCCCTACCCGGAAAACGTTCGCACCGCGCGCGAAGTGGAGGCCGTGA TCCGCGACCTGGGCGCCGAGCCTGCGACCATCGCACTGATCGGCGGGCGCATCCGCATCGGCCTTTCCGATGACGAGCTG GAGCTGCTCGGCCGCTCGGGCCAGGCGCTCAAGGTCAGCCGCCGCGACCTGCCGGCCGTGCTGGCCGGCGGCGGGCTCGG CGCCACCACCGTGGCTGGCACGATGATCTGTGCCGCGCTGGCCGGCATCGAGGTGTTCGTCACCGGCGGCATTGGCGGCG TGCACCGCGGTGCGCAGGAAACCTTTGACATCTCGGCTGACCTGCAGGAACTGGCGAGGACCTCGGTGGCGGTGGTGTGT GCCGGTGCAAAGTCCATCCTGGACATAGCGCTCACGCTGGAATACCTGGAAACGCACGGCGTGCCGGTGCTCAGTTGCGA GCAGGACAACTTCGCCGCGTTCTACACGCGCGACAGTGGCTTTCGCGCGGACTTCAGGCTGGACGACGCGGCGGCGCAGG CACGCTTCATCCGCACCAAGTGGGACCTGGGCCTCGCGGGCGGCGTGGTCCTGAGCACGCCAGTGCCGCAAGCGGCAGCG ATGGCGCGCGAGGAGATTGACGCGCTGACCGAGCAGGCGCTCGCCGAGGCCAAGGCACAAGGCGTCACCGGCAAGGCCGT GACACCCTTCCTGCTGGCCCGCATCAAGGCGCTGACGGGTGGCCGCAGCCTGGCGACCAACATCGCGCTCGTGAAACACA ACGCCGCGGTGGGGGCCAGGCTGGCGCTGGCGTTGGCACGGGCGGAGCGTGGGGCAGGGCATGGGGCGGGCGCGGCGTAG
Upstream 100 bases:
>100_bases CACCCATCGGCGCCTTCACGGCACCCCGCGCCTGCACAGCAAACCGTGGACCCGCCTTATGCTGCACACTTGGGTGAACC ACACCATTGAAAGCATTGCC
Downstream 100 bases:
>100_bases CCGCCCGAACGTCCGCTCTCCACCAAACGTCGCGTCAGTTTGCCGCCCCGGTCCCGCCGTCGAGCGCTTTGGATGCGACC GCCAGACGCAGACGCTCAAG
Product: indigoidine synthase A-like protein
Products: NA
Alternate protein names: PsiMP glycosidase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MVTNLAHSWLIRSAPVVAAQAAGRPLVALESTIIAHGMPYPENVRTAREVEAVIRDLGAEPATIALIGGRIRIGLSDDEL ELLGRSGQALKVSRRDLPAVLAGGGLGATTVAGTMICAALAGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVC AGAKSILDIALTLEYLETHGVPVLSCEQDNFAAFYTRDSGFRADFRLDDAAAQARFIRTKWDLGLAGGVVLSTPVPQAAA MAREEIDALTEQALAEAKAQGVTGKAVTPFLLARIKALTGGRSLATNIALVKHNAAVGARLALALARAERGAGHGAGAA
Sequences:
>Translated_319_residues MVTNLAHSWLIRSAPVVAAQAAGRPLVALESTIIAHGMPYPENVRTAREVEAVIRDLGAEPATIALIGGRIRIGLSDDEL ELLGRSGQALKVSRRDLPAVLAGGGLGATTVAGTMICAALAGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVC AGAKSILDIALTLEYLETHGVPVLSCEQDNFAAFYTRDSGFRADFRLDDAAAQARFIRTKWDLGLAGGVVLSTPVPQAAA MAREEIDALTEQALAEAKAQGVTGKAVTPFLLARIKALTGGRSLATNIALVKHNAAVGARLALALARAERGAGHGAGAA >Mature_319_residues MVTNLAHSWLIRSAPVVAAQAAGRPLVALESTIIAHGMPYPENVRTAREVEAVIRDLGAEPATIALIGGRIRIGLSDDEL ELLGRSGQALKVSRRDLPAVLAGGGLGATTVAGTMICAALAGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVC AGAKSILDIALTLEYLETHGVPVLSCEQDNFAAFYTRDSGFRADFRLDDAAAQARFIRTKWDLGLAGGVVLSTPVPQAAA MAREEIDALTEQALAEAKAQGVTGKAVTPFLLARIKALTGGRSLATNIALVKHNAAVGARLALALARAERGAGHGAGAA
Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil [H]
COG id: COG2313
COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family [H]
Homologues:
Organism=Escherichia coli, GI1788490, Length=285, Percent_Identity=60.3508771929825, Blast_Score=336, Evalue=9e-94, Organism=Caenorhabditis elegans, GI25147470, Length=299, Percent_Identity=49.8327759197324, Blast_Score=286, Evalue=1e-77, Organism=Drosophila melanogaster, GI24580669, Length=304, Percent_Identity=50, Blast_Score=279, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022830 - InterPro: IPR007342 [H]
Pfam domain/function: PF04227 Indigoidine_A [H]
EC number: NA
Molecular weight: Translated: 32853; Mature: 32853
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTNLAHSWLIRSAPVVAAQAAGRPLVALESTIIAHGMPYPENVRTAREVEAVIRDLGAE CCCCHHHHHHHHCCCEEEHHHCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC PATIALIGGRIRIGLSDDELELLGRSGQALKVSRRDLPAVLAGGGLGATTVAGTMICAAL CEEEEEECCEEEEECCCCHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHH AGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVCAGAKSILDIALTLEYLETHG HCCEEEEECCCCHHCCCCHHHCCCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHCC VPVLSCEQDNFAAFYTRDSGFRADFRLDDAAAQARFIRTKWDLGLAGGVVLSTPVPQAAA CEEEEECCCCEEEEEECCCCCEECEEECHHHHHHHHHHEECCCCCCCCEEEECCCCHHHH MAREEIDALTEQALAEAKAQGVTGKAVTPFLLARIKALTGGRSLATNIALVKHNAAVGAR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHHHH LALALARAERGAGHGAGAA HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVTNLAHSWLIRSAPVVAAQAAGRPLVALESTIIAHGMPYPENVRTAREVEAVIRDLGAE CCCCHHHHHHHHCCCEEEHHHCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC PATIALIGGRIRIGLSDDELELLGRSGQALKVSRRDLPAVLAGGGLGATTVAGTMICAAL CEEEEEECCEEEEECCCCHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHH AGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVCAGAKSILDIALTLEYLETHG HCCEEEEECCCCHHCCCCHHHCCCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHCC VPVLSCEQDNFAAFYTRDSGFRADFRLDDAAAQARFIRTKWDLGLAGGVVLSTPVPQAAA CEEEEECCCCEEEEEECCCCCEECEEECHHHHHHHHHHEECCCCCCCCEEEECCCCHHHH MAREEIDALTEQALAEAKAQGVTGKAVTPFLLARIKALTGGRSLATNIALVKHNAAVGAR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHHHH LALALARAERGAGHGAGAA HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA