Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ybhN [H]

Identifier: 91785937

GI number: 91785937

Start: 23414

End: 24430

Strand: Reverse

Name: ybhN [H]

Synonym: Bpro_0024

Alternate gene names: 91785937

Gene position: 24430-23414 (Counterclockwise)

Preceding gene: 91785938

Following gene: 91785935

Centisome position: 0.47

GC content: 65.78

Gene sequence:

>1017_bases
ATGACCACCAGCCCCGACGCAGCCCGCCCCGCAGTCCCGGCCCCGCGGCGCAAGAGCCGGCATAAATTCACCGGCAAAGC
CTGGTGGCCATGGCTCAAGCGCGGCGCCAGCGTGGTGTTCTTTGCACTGGTGATCGGCCTGCTGGTGTCCCAGGCACGCC
ACATCGAATGGCATCAGGTGCTCACCTCGCTGCAGCGCTATCCACTCACCGCCGCCTGGGGCGCCGTGCTGCTCGCCCTG
ACGAGTTTCGCGCTCTACAGCACCTTCGACCTGCTCGGGCGGCATTACACCGACCACACCCTGCCTGCGCCCACCGTGAT
GCTGGTCACCTTCATCAGCTACGCCTTCAACCTCAACCTCGGCTCGCTGGTGGGCGGCGTCGCCTTCCGCTTCCGCCTGT
ATTCACGCCTGGGCCTGCCCACCGGGGTCATCACCCGCATCATGTCGCTGAGCATGCTCAGCAACTGGATGGGCTATCTG
CTGCTGGGCGGCCTGATCTTCAGCCTGCGGCCCCCCGCCGTGCCCGCCGACTGGGGCATAGACACCGCACACCTGCGCCT
GATCGGTTTTGCCTTGCTGGCCGGTGCCGCGGGCTACCTGGGCGTGTGCGTGTTTTCGCGCCAACGCGTGTTCTGGCTGC
GCGGCCACGAGATTGACCTGCCCTCGGTCAGGCTGGCCGGCCTGCAGCTGGTGATGGGCGCCACCAACTGGCTGGTGATG
TCGGGCATTATTTTCATCCTGCTGCAGCACCGCATCGAGTTTTCCGCCGTCGTCAGCGTGCTGCTGCTGGCTGCCATCGC
CGGCGTGATCACCCACATACCGGGCAACCTGGGGGTGCTGGAGGCGGTCTTCGTGGCCCTGCTGTCGCACCAGATGGCCC
GGCATGAATTGCTGGCTGCGCTGGTGGCATACCGGGTTATTTACTACCTGATGCCGCTGGGCATCGCGACGGTGGCCTAC
CTCATCATTGAAACCCGAGCCAAAAAGGCCAGCAGTCCGGGCAAGCAGGCCGCGTAG

Upstream 100 bases:

>100_bases
CTCACGCCTGCGCTGGCACCCGCCGACCCGACGGCGCACATCAGCACCGCGCAGGCAGACGCCGTCCACCGCGCGGACCC
GACCACCCCGTGAGCCGTGA

Downstream 100 bases:

>100_bases
GCTACCTGTGCCCCCACCAAACCTCCCGGGATTTTTCAACCTGGAAACGGCAGTTGGATGCGTCCGAGTGCGCCGTGATC
GGCGTGCCAGGCAAGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTTSPDAARPAVPAPRRKSRHKFTGKAWWPWLKRGASVVFFALVIGLLVSQARHIEWHQVLTSLQRYPLTAAWGAVLLAL
TSFALYSTFDLLGRHYTDHTLPAPTVMLVTFISYAFNLNLGSLVGGVAFRFRLYSRLGLPTGVITRIMSLSMLSNWMGYL
LLGGLIFSLRPPAVPADWGIDTAHLRLIGFALLAGAAGYLGVCVFSRQRVFWLRGHEIDLPSVRLAGLQLVMGATNWLVM
SGIIFILLQHRIEFSAVVSVLLLAAIAGVITHIPGNLGVLEAVFVALLSHQMARHELLAALVAYRVIYYLMPLGIATVAY
LIIETRAKKASSPGKQAA

Sequences:

>Translated_338_residues
MTTSPDAARPAVPAPRRKSRHKFTGKAWWPWLKRGASVVFFALVIGLLVSQARHIEWHQVLTSLQRYPLTAAWGAVLLAL
TSFALYSTFDLLGRHYTDHTLPAPTVMLVTFISYAFNLNLGSLVGGVAFRFRLYSRLGLPTGVITRIMSLSMLSNWMGYL
LLGGLIFSLRPPAVPADWGIDTAHLRLIGFALLAGAAGYLGVCVFSRQRVFWLRGHEIDLPSVRLAGLQLVMGATNWLVM
SGIIFILLQHRIEFSAVVSVLLLAAIAGVITHIPGNLGVLEAVFVALLSHQMARHELLAALVAYRVIYYLMPLGIATVAY
LIIETRAKKASSPGKQAA
>Mature_337_residues
TTSPDAARPAVPAPRRKSRHKFTGKAWWPWLKRGASVVFFALVIGLLVSQARHIEWHQVLTSLQRYPLTAAWGAVLLALT
SFALYSTFDLLGRHYTDHTLPAPTVMLVTFISYAFNLNLGSLVGGVAFRFRLYSRLGLPTGVITRIMSLSMLSNWMGYLL
LGGLIFSLRPPAVPADWGIDTAHLRLIGFALLAGAAGYLGVCVFSRQRVFWLRGHEIDLPSVRLAGLQLVMGATNWLVMS
GIIFILLQHRIEFSAVVSVLLLAAIAGVITHIPGNLGVLEAVFVALLSHQMARHELLAALVAYRVIYYLMPLGIATVAYL
IIETRAKKASSPGKQAA

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr0712 [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=310, Percent_Identity=43.8709677419355, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37024; Mature: 36892

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPDAARPAVPAPRRKSRHKFTGKAWWPWLKRGASVVFFALVIGLLVSQARHIEWHQV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH
LTSLQRYPLTAAWGAVLLALTSFALYSTFDLLGRHYTDHTLPAPTVMLVTFISYAFNLNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH
GSLVGGVAFRFRLYSRLGLPTGVITRIMSLSMLSNWMGYLLLGGLIFSLRPPAVPADWGI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DTAHLRLIGFALLAGAAGYLGVCVFSRQRVFWLRGHEIDLPSVRLAGLQLVMGATNWLVM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SGIIFILLQHRIEFSAVVSVLLLAAIAGVITHIPGNLGVLEAVFVALLSHQMARHELLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVAYRVIYYLMPLGIATVAYLIIETRAKKASSPGKQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTSPDAARPAVPAPRRKSRHKFTGKAWWPWLKRGASVVFFALVIGLLVSQARHIEWHQV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH
LTSLQRYPLTAAWGAVLLALTSFALYSTFDLLGRHYTDHTLPAPTVMLVTFISYAFNLNL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH
GSLVGGVAFRFRLYSRLGLPTGVITRIMSLSMLSNWMGYLLLGGLIFSLRPPAVPADWGI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DTAHLRLIGFALLAGAAGYLGVCVFSRQRVFWLRGHEIDLPSVRLAGLQLVMGATNWLVM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SGIIFILLQHRIEFSAVVSVLLLAAIAGVITHIPGNLGVLEAVFVALLSHQMARHELLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVAYRVIYYLMPLGIATVAYLIIETRAKKASSPGKQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]