| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mnmG [H]
Identifier: 91785745
GI number: 91785745
Start: 4815874
End: 4817832
Strand: Reverse
Name: mnmG [H]
Synonym: Bxe_A0028
Alternate gene names: 91785745
Gene position: 4817832-4815874 (Counterclockwise)
Preceding gene: 91785746
Following gene: 91785744
Centisome position: 98.41
GC content: 61.15
Gene sequence:
>1959_bases ATGCTCTTTCCCACAGAATTTGACGTAATCGTCGTCGGCGGCGGTCATGCCGGCACGGAAGCCGCGTTGGCTTCAGCTCG CATGGGCAATACGACGCTCCTGCTGACCCACAACATCGAAACCCTCGGCCAGATGAGCTGCAATCCGTCGATTGGCGGCA TTGGCAAAGGCCATCTGGTCAAGGAAGTCGACGCGCTCGGCGGCGCAATGGCGGCCGCGACGGACGAGGGCGGCATCCAG TTCCGCATCCTGAATTCGTCGAAAGGCCCGGCTGTACGTGCAACGCGCGCTCAGGCTGACCGTCTGCTGTACAAGCAGGC TATCCGGCACCGGCTCGAAAATCAGCCAAACCTGTGGCTGTTCCAGCAAGCGGTTGACGATCTGATGGTGGAGGGCGACC GCGTCGTCGGCGCTGTGACGCAGGTGGGAATTCGTTTCCGCGGGCGCGCCGTGGTTTTGACGGCAGGCACGTTCCTCGAC GGCAAAATTCACGTGGGGTTGAACAACTATACCGGCGGCCGCGCCGGTGATCCGGCGGCGGTTTCGTTGTCGGCGCGTCT GAAGGAATTGAAGTTGCCGCAAGGCCGTCTCAAGACGGGGACGCCGCCGCGTATCGATGGCCGCACGATCGATTTTTCGC AACTCGAAGAGCAGCCGGGCGATCTGGATCCGGTGCCGGTGTTCTCGTTCCTCGGGCGCGTCGAGCAGCATCCGCGGCAG GTGCCGTGCTGGGTTACGCACACGAACGCGCGGACGCACGACATCATCCGTGGCGGACTGGACCGTTCGCCTATGTACAC CGGGGTGATCGAGGGGGTGGGGCCACGCTATTGCCCATCGATCGAGGACAAGATTCACCGATTCGCTTCAAAGGAGTCAC ATCAGATCTTCCTCGAGCCAGAAGGGCTGACCACGAACGAGTTCTATCCGAATGGAATCTCCACGAGTCTGCCGTTCGAC GTTCAACTGGAACTGGTCCGCTCGATGCGAGGTTTGGAGCATGCGCACATCCTGAGACCGGGCTATGCGATCGAATACGA CTACTTCGATCCGCGTGGGTTGAAGGCTTCGCTCGAAACCAAGGTTATCAGTGGGCTCTTTTTTGCCGGCCAGATCAACG GCACGACCGGCTATGAAGAGGCAGCAGCGCAGGGTCTGCTGGCCGGCATCAACGCGGGCCTGTATGTGCAGGGCAAGGAA GCATGGTGCCCGCGCCGCGATCAGGCTTACCTTGGCGTCTTGGTCGACGATTTGGTGACGCGCGGCGTGTCTGAACCGTA TCGGATGTTCACGAGCCGTGCCGAATATCGTCTGAGTCTGCGCGAAGACAATGCGGATATGCGTCTCACCGAGATTGGCC GTGAGTTGGGTGTGGTCGACGACGTTCGCTGGGATGCCTTCAGCCGTAAGCGCGACGCTGTTTCACGTGAAACAGAGCGG CTTCGCACGACATGGGTCAATCCTAAGACGTTATCCGCCGACGAGGCCACAGCGCTGCTCGGCAAGCCAATCGATCACGA ATATAGTCTGGCGGATCTGCTGCGCCGCCCGGGTGTGTCGTACGACGGCGTTTGCGCGTTGCGTGCCGGCGCGTGCGCCG CGCCTGAAACCTTGGCCGAAGACGACGTGCTGCTCGCGCAGATCAAGGAACAGATCGAGATTGGCATCAAATATCAGGGC TACATCGACCGCCAGGCGGGTGAAATCGAGCGAAATGAGGCGCACGAAAGTACGCGTCTGCCCGAAGGGCTGGATTACGC GGAAGTCAGAGGGCTCTCGTTCGAAGCACGGCAAAAATTGACGCAGTTTCGCCCCGAAACCATCGGCCAGGCGTCGCGTA TTTCGGGTATTACGCCGGCGGCCATTTCCTTGCTGATGGTCCATCTGAAGCGCGGCTTGGGTCGTCGCCCGACGAAGCCC GCCGAGTCGGGCACCGACAGCGCGCCGGTGACGCAATGA
Upstream 100 bases:
>100_bases TGGCCATTCGGACGAAATTCGGGCCTAAACCGAACCCGTTATAATTCGCCCATACATTTCCTTTGAAAGGCTCACGCGAT GACCTGGCGTGAGATCCGCG
Downstream 100 bases:
>100_bases CGGTAAGCCAGAAGGGAAGCGGCAGGGAGGCGTTGGAGCCACTGCTGGCGGACGGTGTTCGCGAACTCGGCCTCGCCCTG AGCGATGCGCAACTCGGCAA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MLFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQ VPCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKE AWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAEDDVLLAQIKEQIEIGIKYQG YIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKP AESGTDSAPVTQ
Sequences:
>Translated_652_residues MLFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQ VPCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKE AWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAEDDVLLAQIKEQIEIGIKYQG YIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKP AESGTDSAPVTQ >Mature_652_residues MLFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQ VPCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKE AWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAEDDVLLAQIKEQIEIGIKYQG YIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKP AESGTDSAPVTQ
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=658, Percent_Identity=44.6808510638298, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI19882217, Length=683, Percent_Identity=43.0453879941435, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI183227703, Length=698, Percent_Identity=42.1203438395415, Blast_Score=468, Evalue=1e-131, Organism=Escherichia coli, GI2367273, Length=637, Percent_Identity=68.1318681318681, Blast_Score=886, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=642, Percent_Identity=40.6542056074766, Blast_Score=470, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321202, Length=633, Percent_Identity=45.1816745655608, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI24658174, Length=640, Percent_Identity=46.09375, Blast_Score=495, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71430; Mature: 71430
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHCEEECCCEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCC VPCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEEECCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLET CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCHHHHH KVISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVT HHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAE HHHEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHCC DDVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKL CHHHHHHHHHHHHCCEEEECEECCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH TQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKPAESGTDSAPVTQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLFPTEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVDDLMVEGDRVVGAVTQVGIRFRGRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHCEEECCCEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCC VPCWVTHTNARTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEEECCCCHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLET CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCEEEEECCCCCCCCCHHHHH KVISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQGKEAWCPRRDQAYLGVLVDDLVT HHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCALRAGACAAPETLAE HHHEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHCC DDVLLAQIKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKL CHHHHHHHHHHHHCCEEEECEECCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH TQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKPAESGTDSAPVTQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA