| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is nmoT [H]
Identifier: 91785704
GI number: 91785704
Start: 4765039
End: 4766550
Strand: Reverse
Name: nmoT [H]
Synonym: Bxe_A0070
Alternate gene names: 91785704
Gene position: 4766550-4765039 (Counterclockwise)
Preceding gene: 91785705
Following gene: 91785703
Centisome position: 97.36
GC content: 60.05
Gene sequence:
>1512_bases ATGTTGGCCAAGATTCGGCGGATGCATTTCCGCGACGGCGTCCCTCTTCGGGACATTGCTAGACAGACTGGGCTTTCGAG AAATACGATTCGACGATGGTTGCGCGAGCCGTCGGCGAGCGAGCCGAAGTTCGCCAGACGCGTCAGCAACAGCGTCGTCG ACCCATGGTCGGAGCAACTGCGACTGTGGCTGGTCGCCGATACAAGGCGTACAAGACGGGAACGGCGCTCCGCTACTCAG ATGTATGAAGATTTACGGGCGGCTGGCTACGACGGCAGCTACGACCGCGTGTCGGCCTTTGTGCGCAACTGGAAGAAAGA GCGCGATTCCGGGGCGCAACGTGGCGCCTTCATACCTCTTGCCTTTGAATACGGTGAAGCGTTCCAGTTCGACTGGAGCT GCGAGTATGTTTTTATTGGTGGCCTCAGGCGACGTGTAGAGGTCGCACACATGAAGCTCGCCGCGAGTCGTGCCTTCTGG CTTGTGGCTTATCCGACCCAAAGCCACGAGATGCTGTTCGACGCCCACGCACGGGCATTCGTCGCGTTAGGCGGCATTCC CCGGCGCGGCATCTACGACAATATGAAGACTGCCGTCGACAAGGTTGGTCCGGGTAAGGAGCGAGCTATCAATGCGCGCT TCCATGCGATGTGCGGTCACTACCTGTTCGAGCCTGAGTTCTGCAACCGAGCAGCCGGCTGGGAGAAAGGCATCGTTGAG AAGAATGTTCAGGACCGGCGCCGACAGATATGGCACGACGCAATTGGTATCCGGTGGGAATCGCTTGAGGTCCTGAACAT ATGGCTGGCCGAACGCTGTCAACAGGCCTGGAAACAATTGAGACATCCGCAATGGCCTGAGCTCAGTGTAGAAGACGCCC TGGCGGATGAGCGCCCCCGGCTGATGCAGGTTCCGAAGCCGTTCGACGGCTACATTGAGAAGCCCGTGCGCGTCTCGCCG ACGAGTCTGGTACATCTCGACCGGAACCGTTATAGCGTGCCGACGGAGTATGCACATCACATCGTGAGCCTGCGTAGCTA TCCGACCTACATCAGCCTCGTAGCCGACGGCGTCGAAATTGCCCGCCATCCCCGCAGCTTCGACCGTTACCAAACCTTCT ACGACTGGAGGCACTACATCGCTCTGGTGGAGCGCAAGCCCGGTGCGTTGCGGAACGGCGCGCCGTTCCTGACGATGCCA GAGCCGATGCTTCGCCTGCAGAGACACCTGCTGAGGCAGACCGGTGGCGACCGCGTAATGGTCCAGGTTCTGGCGGCCAC TCCCGTTCATGGCCTGGAGGCCGTGCTGGTTGCCGTCGAACTCGCGCTCGAGTCCGGACGTCCGAGCGGAGACCATGTCC TGAACATCCTTGCCCGACTGAAGAGCCAGTCGGTCCATTCGGGTGACGGGGTGAGAACAGCAATCACGCTCAAGGTCGAA CCGCTTGCAGACGTCTACCGTTATGAACGACTGCGCGTTACGCGCGACCAGGAGGACGGTCATGTCGAATGA
Upstream 100 bases:
>100_bases AACTGACCCACTTCCGCTAGAAATTTGCATCGAAAATTGACCCACATGTTCAACTTCCTGCTTGGACGCCAAGCAGGAGA ACGGAGTGATAACCGTGAGC
Downstream 100 bases:
>100_bases AACTGCCGCACTTCTCAAGTCGCTGAAGCTTCACGGAATGGCGCAAGCGTGGCCCGAACTGGTAGCACAGGCGCGACACA GCGACTTTGAACCGGAGAAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MLAKIRRMHFRDGVPLRDIARQTGLSRNTIRRWLREPSASEPKFARRVSNSVVDPWSEQLRLWLVADTRRTRRERRSATQ MYEDLRAAGYDGSYDRVSAFVRNWKKERDSGAQRGAFIPLAFEYGEAFQFDWSCEYVFIGGLRRRVEVAHMKLAASRAFW LVAYPTQSHEMLFDAHARAFVALGGIPRRGIYDNMKTAVDKVGPGKERAINARFHAMCGHYLFEPEFCNRAAGWEKGIVE KNVQDRRRQIWHDAIGIRWESLEVLNIWLAERCQQAWKQLRHPQWPELSVEDALADERPRLMQVPKPFDGYIEKPVRVSP TSLVHLDRNRYSVPTEYAHHIVSLRSYPTYISLVADGVEIARHPRSFDRYQTFYDWRHYIALVERKPGALRNGAPFLTMP EPMLRLQRHLLRQTGGDRVMVQVLAATPVHGLEAVLVAVELALESGRPSGDHVLNILARLKSQSVHSGDGVRTAITLKVE PLADVYRYERLRVTRDQEDGHVE
Sequences:
>Translated_503_residues MLAKIRRMHFRDGVPLRDIARQTGLSRNTIRRWLREPSASEPKFARRVSNSVVDPWSEQLRLWLVADTRRTRRERRSATQ MYEDLRAAGYDGSYDRVSAFVRNWKKERDSGAQRGAFIPLAFEYGEAFQFDWSCEYVFIGGLRRRVEVAHMKLAASRAFW LVAYPTQSHEMLFDAHARAFVALGGIPRRGIYDNMKTAVDKVGPGKERAINARFHAMCGHYLFEPEFCNRAAGWEKGIVE KNVQDRRRQIWHDAIGIRWESLEVLNIWLAERCQQAWKQLRHPQWPELSVEDALADERPRLMQVPKPFDGYIEKPVRVSP TSLVHLDRNRYSVPTEYAHHIVSLRSYPTYISLVADGVEIARHPRSFDRYQTFYDWRHYIALVERKPGALRNGAPFLTMP EPMLRLQRHLLRQTGGDRVMVQVLAATPVHGLEAVLVAVELALESGRPSGDHVLNILARLKSQSVHSGDGVRTAITLKVE PLADVYRYERLRVTRDQEDGHVE >Mature_503_residues MLAKIRRMHFRDGVPLRDIARQTGLSRNTIRRWLREPSASEPKFARRVSNSVVDPWSEQLRLWLVADTRRTRRERRSATQ MYEDLRAAGYDGSYDRVSAFVRNWKKERDSGAQRGAFIPLAFEYGEAFQFDWSCEYVFIGGLRRRVEVAHMKLAASRAFW LVAYPTQSHEMLFDAHARAFVALGGIPRRGIYDNMKTAVDKVGPGKERAINARFHAMCGHYLFEPEFCNRAAGWEKGIVE KNVQDRRRQIWHDAIGIRWESLEVLNIWLAERCQQAWKQLRHPQWPELSVEDALADERPRLMQVPKPFDGYIEKPVRVSP TSLVHLDRNRYSVPTEYAHHIVSLRSYPTYISLVADGVEIARHPRSFDRYQTFYDWRHYIALVERKPGALRNGAPFLTMP EPMLRLQRHLLRQTGGDRVMVQVLAATPVHGLEAVLVAVELALESGRPSGDHVLNILARLKSQSVHSGDGVRTAITLKVE PLADVYRYERLRVTRDQEDGHVE
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017894 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 58225; Mature: 58225
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKIRRMHFRDGVPLRDIARQTGLSRNTIRRWLREPSASEPKFARRVSNSVVDPWSEQL CCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHCE RLWLVADTRRTRRERRSATQMYEDLRAAGYDGSYDRVSAFVRNWKKERDSGAQRGAFIPL EEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE AFEYGEAFQFDWSCEYVFIGGLRRRVEVAHMKLAASRAFWLVAYPTQSHEMLFDAHARAF EEECCCEEEECCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHH VALGGIPRRGIYDNMKTAVDKVGPGKERAINARFHAMCGHYLFEPEFCNRAAGWEKGIVE HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHH KNVQDRRRQIWHDAIGIRWESLEVLNIWLAERCQQAWKQLRHPQWPELSVEDALADERPR CCHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC LMQVPKPFDGYIEKPVRVSPTSLVHLDRNRYSVPTEYAHHIVSLRSYPTYISLVADGVEI CEECCCCCCHHHCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ARHPRSFDRYQTFYDWRHYIALVERKPGALRNGAPFLTMPEPMLRLQRHLLRQTGGDRVM HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEE VQVLAATPVHGLEAVLVAVELALESGRPSGDHVLNILARLKSQSVHSGDGVRTAITLKVE HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC PLADVYRYERLRVTRDQEDGHVE CHHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure MLAKIRRMHFRDGVPLRDIARQTGLSRNTIRRWLREPSASEPKFARRVSNSVVDPWSEQL CCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHCE RLWLVADTRRTRRERRSATQMYEDLRAAGYDGSYDRVSAFVRNWKKERDSGAQRGAFIPL EEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE AFEYGEAFQFDWSCEYVFIGGLRRRVEVAHMKLAASRAFWLVAYPTQSHEMLFDAHARAF EEECCCEEEECCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHH VALGGIPRRGIYDNMKTAVDKVGPGKERAINARFHAMCGHYLFEPEFCNRAAGWEKGIVE HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHH KNVQDRRRQIWHDAIGIRWESLEVLNIWLAERCQQAWKQLRHPQWPELSVEDALADERPR CCHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC LMQVPKPFDGYIEKPVRVSPTSLVHLDRNRYSVPTEYAHHIVSLRSYPTYISLVADGVEI CEECCCCCCHHHCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ARHPRSFDRYQTFYDWRHYIALVERKPGALRNGAPFLTMPEPMLRLQRHLLRQTGGDRVM HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEE VQVLAATPVHGLEAVLVAVELALESGRPSGDHVLNILARLKSQSVHSGDGVRTAITLKVE HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC PLADVYRYERLRVTRDQEDGHVE CHHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9023192 [H]