| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ydaV [C]
Identifier: 91785703
GI number: 91785703
Start: 4764240
End: 4765049
Strand: Reverse
Name: ydaV [C]
Synonym: Bxe_A0071
Alternate gene names: 91785703
Gene position: 4765049-4764240 (Counterclockwise)
Preceding gene: 91785704
Following gene: 91785702
Centisome position: 97.33
GC content: 55.68
Gene sequence:
>810_bases ATGTCGAATGAAACTGCCGCACTTCTCAAGTCGCTGAAGCTTCACGGAATGGCGCAAGCGTGGCCCGAACTGGTAGCACA GGCGCGACACAGCGACTTTGAACCGGAGAAATTCATGCAGATGCTTCTCAAAGCGGAAACGGCTGAACGACAGGTCAGGT CAATCAACTATCAGATGGCCGCCGCGCGTTTCCCCGCGCACCGTGACCTTGCCGGCTTCGACTTCCAGCAGGCGAGCGTC GATGAAACTCTTGTGCGAGAACTCCACACGGTCCGCTTCTGCGAGTCCGCGCAGAACGTAGTGTTCATCGGTGGACCTGG AACGGGAAAGACGCACCTTGCGACGTCCATCGGTATTGACGCAATACAGAATCATGCAAAGCGGGTGCGGTTCTTTACGA CGGTTGAACTCGTAAACCAGCTCGAAGCGGAGAAGGCAGCCGGCAAACCCGGGCAACTGGCAAATCGCCTGATGTATGTC GATGCCATTGTTCTGGACGAGCTGGGCTATCTCCCGTTTACGCAAACCGGAGGGGCACTACTGTTCCATCTGCTCTCGAA ACTTTACGAGCGCACGAGCGTTCTTGTTACGACCAATCTGAGCTTTACTGAATGGTCGAACGTGTTCGGCGACGCAAAGA TGACGACCGCGCTGCTTGACCGACTCACACACCACTGCCATATAGTGGAAACAGGCAACGATTCCTGGCGCTTTAAAAAC AGCACGGCGGGGCAGCCCGCTTCGCGGGCTGCAACCCGTAAAAGCTCACCCAAACGACAAAAAGAGGAGGAAATCGACGC ACCAGAATGA
Upstream 100 bases:
>100_bases GGTGACGGGGTGAGAACAGCAATCACGCTCAAGGTCGAACCGCTTGCAGACGTCTACCGTTATGAACGACTGCGCGTTAC GCGCGACCAGGAGGACGGTC
Downstream 100 bases:
>100_bases TGTTTCTGAGCATCAGGGGTGGGTCAATTCTAGATGCAAAAAGTGGGTCAGTTCGCGGCGCAAATCAACACCCCAGGCTG GGTTAGGCGGATGGACCCTC
Product: putative insertion sequence ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASV DETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYV DAIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN STAGQPASRAATRKSSPKRQKEEEIDAPE
Sequences:
>Translated_269_residues MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASV DETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYV DAIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN STAGQPASRAATRKSSPKRQKEEEIDAPE >Mature_268_residues SNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASVD ETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVD AIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKNS TAGQPASRAATRKSSPKRQKEEEIDAPE
Specific function: Unknown
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001270 - InterPro: IPR002611 [H]
Pfam domain/function: PF01695 IstB [H]
EC number: NA
Molecular weight: Translated: 29972; Mature: 29841
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AARFPAHRDLAGFDFQQASVDETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGID HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH AIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVDAIVLDELGYLPFTQTGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN HHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEECC STAGQPASRAATRKSSPKRQKEEEIDAPE CCCCCCHHHHHHHCCCCCHHHHHCCCCCC >Mature Secondary Structure SNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AARFPAHRDLAGFDFQQASVDETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGID HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH AIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVDAIVLDELGYLPFTQTGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN HHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEECC STAGQPASRAATRKSSPKRQKEEEIDAPE CCCCCCHHHHHHHCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8382825 [H]