Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ydaV [C]

Identifier: 91785703

GI number: 91785703

Start: 4764240

End: 4765049

Strand: Reverse

Name: ydaV [C]

Synonym: Bxe_A0071

Alternate gene names: 91785703

Gene position: 4765049-4764240 (Counterclockwise)

Preceding gene: 91785704

Following gene: 91785702

Centisome position: 97.33

GC content: 55.68

Gene sequence:

>810_bases
ATGTCGAATGAAACTGCCGCACTTCTCAAGTCGCTGAAGCTTCACGGAATGGCGCAAGCGTGGCCCGAACTGGTAGCACA
GGCGCGACACAGCGACTTTGAACCGGAGAAATTCATGCAGATGCTTCTCAAAGCGGAAACGGCTGAACGACAGGTCAGGT
CAATCAACTATCAGATGGCCGCCGCGCGTTTCCCCGCGCACCGTGACCTTGCCGGCTTCGACTTCCAGCAGGCGAGCGTC
GATGAAACTCTTGTGCGAGAACTCCACACGGTCCGCTTCTGCGAGTCCGCGCAGAACGTAGTGTTCATCGGTGGACCTGG
AACGGGAAAGACGCACCTTGCGACGTCCATCGGTATTGACGCAATACAGAATCATGCAAAGCGGGTGCGGTTCTTTACGA
CGGTTGAACTCGTAAACCAGCTCGAAGCGGAGAAGGCAGCCGGCAAACCCGGGCAACTGGCAAATCGCCTGATGTATGTC
GATGCCATTGTTCTGGACGAGCTGGGCTATCTCCCGTTTACGCAAACCGGAGGGGCACTACTGTTCCATCTGCTCTCGAA
ACTTTACGAGCGCACGAGCGTTCTTGTTACGACCAATCTGAGCTTTACTGAATGGTCGAACGTGTTCGGCGACGCAAAGA
TGACGACCGCGCTGCTTGACCGACTCACACACCACTGCCATATAGTGGAAACAGGCAACGATTCCTGGCGCTTTAAAAAC
AGCACGGCGGGGCAGCCCGCTTCGCGGGCTGCAACCCGTAAAAGCTCACCCAAACGACAAAAAGAGGAGGAAATCGACGC
ACCAGAATGA

Upstream 100 bases:

>100_bases
GGTGACGGGGTGAGAACAGCAATCACGCTCAAGGTCGAACCGCTTGCAGACGTCTACCGTTATGAACGACTGCGCGTTAC
GCGCGACCAGGAGGACGGTC

Downstream 100 bases:

>100_bases
TGTTTCTGAGCATCAGGGGTGGGTCAATTCTAGATGCAAAAAGTGGGTCAGTTCGCGGCGCAAATCAACACCCCAGGCTG
GGTTAGGCGGATGGACCCTC

Product: putative insertion sequence ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASV
DETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYV
DAIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN
STAGQPASRAATRKSSPKRQKEEEIDAPE

Sequences:

>Translated_269_residues
MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASV
DETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYV
DAIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN
STAGQPASRAATRKSSPKRQKEEEIDAPE
>Mature_268_residues
SNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMAAARFPAHRDLAGFDFQQASVD
ETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGIDAIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVD
AIVLDELGYLPFTQTGGALLFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKNS
TAGQPASRAATRKSSPKRQKEEEIDAPE

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 29972; Mature: 29841

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARFPAHRDLAGFDFQQASVDETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGID
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
AIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVDAIVLDELGYLPFTQTGGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN
HHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEECC
STAGQPASRAATRKSSPKRQKEEEIDAPE
CCCCCCHHHHHHHCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
SNETAALLKSLKLHGMAQAWPELVAQARHSDFEPEKFMQMLLKAETAERQVRSINYQMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARFPAHRDLAGFDFQQASVDETLVRELHTVRFCESAQNVVFIGGPGTGKTHLATSIGID
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
AIQNHAKRVRFFTTVELVNQLEAEKAAGKPGQLANRLMYVDAIVLDELGYLPFTQTGGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LFHLLSKLYERTSVLVTTNLSFTEWSNVFGDAKMTTALLDRLTHHCHIVETGNDSWRFKN
HHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEECC
STAGQPASRAATRKSSPKRQKEEEIDAPE
CCCCCCHHHHHHHCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]