Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is cyaY [H]

Identifier: 91785426

GI number: 91785426

Start: 4487035

End: 4487352

Strand: Reverse

Name: cyaY [H]

Synonym: Bxe_A0353

Alternate gene names: 91785426

Gene position: 4487352-4487035 (Counterclockwise)

Preceding gene: 91785429

Following gene: 91785424

Centisome position: 91.66

GC content: 62.26

Gene sequence:

>318_bases
ATGTCCGATAGTGAATACCTGACCCGCGCGGAAGCCGCGCTAGCCGCCATCGAACGCGCGCTGGACGACACGGATGCCGA
CATCGAACTCGAGCGCAGCGGCAACGTCCTGACCCTCGAATTCGAGAATCGCTCGAAGATTATCGTCAACCTCCAGCCGC
CCATGAGCGAGATCTGGATTGCCGCGAAAGCGGGCGGTTTCCACTTCCGTTTCGTCGATGGCGAGTGGCGTGACACGCGC
AGCGGCACGGAGTTTTTCGCCGCGCTGTCGGAGTACGCGACGCAGCAAGCCGGCGAGCCGGTTCACTTCGAAGCGTAA

Upstream 100 bases:

>100_bases
ATGGCCAAAACCGCTACAATCGCGCGGCCGGGCGCCGCCGCGCGCATCCGAGATACGACTCGCATGACTGTCCCTGAATA
AATAATCGATGGAGTTTAGC

Downstream 100 bases:

>100_bases
AACGCGCAGTCTGGAGGAGCGCCGCAAACGCGGCTCCCGCGATCCCGATCATCCCGACTGCACAGGCAGAATGGCCGCGC
ATTCAGCGCGGCCATTCTGC

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTR
SGTEFFAALSEYATQQAGEPVHFEA

Sequences:

>Translated_105_residues
MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTR
SGTEFFAALSEYATQQAGEPVHFEA
>Mature_104_residues
SDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWIAAKAGGFHFRFVDGEWRDTRS
GTEFFAALSEYATQQAGEPVHFEA

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family [H]

Homologues:

Organism=Escherichia coli, GI1790239, Length=105, Percent_Identity=47.6190476190476, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002908
- InterPro:   IPR020895 [H]

Pfam domain/function: PF01491 Frataxin_Cyay [H]

EC number: NA

Molecular weight: Translated: 11741; Mature: 11610

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWI
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHEEE
AAKAGGFHFRFVDGEWRDTRSGTEFFAALSEYATQQAGEPVHFEA
EEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
SDSEYLTRAEAALAAIERALDDTDADIELERSGNVLTLEFENRSKIIVNLQPPMSEIWI
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHEEE
AAKAGGFHFRFVDGEWRDTRSGTEFFAALSEYATQQAGEPVHFEA
EEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA