Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 91785366

GI number: 91785366

Start: 4427521

End: 4428267

Strand: Reverse

Name: ybgI [C]

Synonym: Bxe_A0413

Alternate gene names: 91785366

Gene position: 4428267-4427521 (Counterclockwise)

Preceding gene: 91785368

Following gene: 91785365

Centisome position: 90.45

GC content: 62.52

Gene sequence:

>747_bases
ATGGATCGGATCGAACTTGAATTGTACTTGAACAATCTCCTTGAAACCGCGCGCTTCAAGGACTATTGCCCCAATGGGCT
GCAGGTCGAAGGGCGTCGCAGGATCAACAGGCTGGCGACCGGCGTAACCGCTTCGGCAGCCTTCCTGGAAGCCGCGCTGG
ATTGGGGCGCGGACGCGGTGCTGGTCCACCACGGCTACTTCTGGCGCAACGAGGCGCCGCAGATCACCGGCCGTAAATAT
GGTCGTCTCAAACTGCTGATCGCCAACGAGCTGAATCTGTTCGCCTATCATCTGCCGCTCGACGACCATCCGGAGTTCGG
CAACAACGCGCAGATCGGCGCGAAGATGGGCTGGATCAGCGACGCGCGCTTCGGCGAGAACGATCTTGGCTGGCTCGCCA
CCTTTCCGATGCCGATCACGCTCGCCCACTTCACCGCGCAAGTCGAGCAGACGCTCGGCCGCACGCCGCTCGTATTCGGC
GACGCGGAGCGCGAACTGCGCCGCGTGGCCTGGTGCACGGGCGCCGCGCAAGGCATGTTCGACGCGGCTATCGACGCGGG
TGCCGACGTTTATCTGACCGGCGAAGTGTCGGAGTCGGTGATGCATACGTCGGCGGAAAGCGGCGTCGCTTTTCTCGCAG
CGGGCCACCATGCCACGGAACGCTTCGGCGTGCAGGCGGTGGGCAAGCACCTGTCCGAGCAGTTCGATATCGAACACCTC
TTTATCGATATCCCTAATCCCGTTTGA

Upstream 100 bases:

>100_bases
CTTGAGAGTCGCAATGATGAACATGAGCGCCAACAGCACGGTCACCGCTTGGGCAAAAAACAGCCAAAAGCGTCTAAGCA
TCTGAAGACTGGAGGTTTAT

Downstream 100 bases:

>100_bases
ATCGCGAAATTCAGATAAAACGCATTAGAGAAGAAAAAAGCAGGAATAACGCAGAGGGCACTTAAAAGGAGGTGCAAAAA
AGTTTGCGATCCGTACGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDRIELELYLNNLLETARFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITGRKY
GRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLATFPMPITLAHFTAQVEQTLGRTPLVFG
DAERELRRVAWCTGAAQGMFDAAIDAGADVYLTGEVSESVMHTSAESGVAFLAAGHHATERFGVQAVGKHLSEQFDIEHL
FIDIPNPV

Sequences:

>Translated_248_residues
MDRIELELYLNNLLETARFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITGRKY
GRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLATFPMPITLAHFTAQVEQTLGRTPLVFG
DAERELRRVAWCTGAAQGMFDAAIDAGADVYLTGEVSESVMHTSAESGVAFLAAGHHATERFGVQAVGKHLSEQFDIEHL
FIDIPNPV
>Mature_248_residues
MDRIELELYLNNLLETARFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAVLVHHGYFWRNEAPQITGRKY
GRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWISDARFGENDLGWLATFPMPITLAHFTAQVEQTLGRTPLVFG
DAERELRRVAWCTGAAQGMFDAAIDAGADVYLTGEVSESVMHTSAESGVAFLAAGHHATERFGVQAVGKHLSEQFDIEHL
FIDIPNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=248, Percent_Identity=49.5967741935484, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27437; Mature: 27437

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIELELYLNNLLETARFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAV
CCEEEEHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQITGRKYGRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWIS
EEECCEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEECCCC
DARFGENDLGWLATFPMPITLAHFTAQVEQTLGRTPLVFGDAERELRRVAWCTGAAQGMF
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCHHCHHH
DAAIDAGADVYLTGEVSESVMHTSAESGVAFLAAGHHATERFGVQAVGKHLSEQFDIEHL
HHHHCCCCCEEEECCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEE
FIDIPNPV
EEECCCCC
>Mature Secondary Structure
MDRIELELYLNNLLETARFKDYCPNGLQVEGRRRINRLATGVTASAAFLEAALDWGADAV
CCEEEEHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQITGRKYGRLKLLIANELNLFAYHLPLDDHPEFGNNAQIGAKMGWIS
EEECCEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEECCCC
DARFGENDLGWLATFPMPITLAHFTAQVEQTLGRTPLVFGDAERELRRVAWCTGAAQGMF
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCHHCHHH
DAAIDAGADVYLTGEVSESVMHTSAESGVAFLAAGHHATERFGVQAVGKHLSEQFDIEHL
HHHHCCCCCEEEECCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEE
FIDIPNPV
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]