Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yoaE [H]

Identifier: 91785306

GI number: 91785306

Start: 4358089

End: 4360167

Strand: Reverse

Name: yoaE [H]

Synonym: Bxe_A0473

Alternate gene names: 91785306

Gene position: 4360167-4358089 (Counterclockwise)

Preceding gene: 91785308

Following gene: 91785305

Centisome position: 89.06

GC content: 63.64

Gene sequence:

>2079_bases
ATGAATGCTCCGACTGAACACGCTCGCGCCGTGTGCCCGCACGATTGCCCCGACACCTGCGCGATGCGCGTGACGGTCGA
GGCCGGTCGGGCGATCAAGGTCGTCGCCGATCCCGAGCATCCTCCAACGCAAGGCGCGCTGTGCACCAAGGTCAGCCGCT
ACGCGGAGCGCGTGCATCATCCGCAGAGACTGACGCGGCCAATGAAGCGTGTCGGGCGCAAAGGCGAGGGGCGCTTTGAG
CCGATCGGCTGGGACGAGGCGTTCCAGCTCGCGGCGCGTCGCCTGTCGGAAATTGCACATCGCGCGCCGGAGGCAATCCT
CCCTTACAGCTATGCCGGCACAATGGGCTTGATTCAGGGCGACAGCATTGCACAACGGTTCTTCCACAAGCTCGGCGCCT
CGCAACTGGATCGCACGATTTGCGCGGCCGCCGGCACAGCCGGGCTGAAGTACACCTACGGCGCGAGCCTCGGCATGCTC
ACCGAGTTTTTCGACGAAAGCGAGCTCATCCTCATCTGGGGCTCGAATCCGATCGCGTCGAACCTCCATTTCTGGACGCG
CGCCCAACAGGCCAAACGCCGCGGTGCACGGCTGATCGCAATCGATCCGTACCGCTCGCTGACGGCCGAAAAATGCCATC
AGCACATCGCTTTGAAACCGGGCACCGACAGCGCTTTGGCGCTCGGTATGATCAACGTGTTGATCAGGGAAAATCTGCTC
GATCACGCTTACATCGAAGCTCATACGTCAGGTTTTGAAGCGCTGAAAGCCCGCGCGCTTAGCTACCCGCCGTCGCGCGC
TGCGGAAATCTGCGGTATTGACGAACGGGTGATCGTCGATCTCGCACGACTTTACGGTGGCACCAGAAAGGCCGCGATCC
GCATGAACTACGGCCTGCAACGCGTACGTGGCGGCGGCAATGCCGTGCGCGCGATCGCTTGCCTGCCGTCGCTCACGGGT
GCTTGGCGCGAGAGAGCGGGGGGCGTGTTGCTGTCGTCGGGCGGCTGGGCGCCGGTCGACTCGTATGCGTTGCAGCGTCC
GGACCTGATGCCGGGTTGGCCGACCAGGACGAGCCGCGTCATCAACATGAACGGGATCGGCGACGCGCTGCTGCACAAGG
GCGACGCGGCGTTCGGTCCCAAGGTCGAAGCGATCGTCGTCTACAACTCGAATCCGGTGGCTGTCGCGCCAGATTCGGAG
CGAGTCGCCGCGGGTTTCGCGCGCGAAGATCTGTTCACAATCGTCCTCGAGCATTTCCAGACCGACACAGCCGACTACGC
CGATCTGTTGCTGCCCGCGACAACTCAACTCGAGCACCTCGACGTGCACAAGTCGTACGGCCACACGCACGTCATGGTCA
ACCTGCCGGCAATCGCGCCGGTCGGCGAAGCGCTTCCGAACACGGAGATTTTCCGCGGCATCGCGCGTCATATGGGCCTC
GACGAGCCCGCGCTGTTCGAGAGCGACGAGACCGTCGCGCAGGCGGCGTTTCGCTGGCAAGACAGAACGCTCGAAGGCGT
AGATTGGGAGACCCTCAAGAAGACCGGCTGGGCCAAGCTGAATCTGCCCGATGCGCCTTTCGCCGAAGGGGGGTTCCAAA
CGCCGTCCGGCAAATGCGAGTTCTACAGCGAGCGCCTCGCGCAACGGGGACTCGACCCACTGCCGGACTATCTGCCTCCC
TACGAATCCGCTGATGGCGCGCCGGAACTTGCCGCCCGTTATCCGCTGGCGATGATCTCGCCGCCCGCCCGCAACTTCCT
GAACAGCACCTTCGTGAATATCGAAAGTCTGCGTTCGACCGAAGGCGAGCCGCATCTCGACATGCATCCGGCCGACGCGC
AATCGCGGGATATCGTCGACGGCGATCAGGTGCGCATTTTTAACGATCGCGGGTCGATGCAGGCGCGCGTCCGCGTTACC
GATAAAGCACGCGAGGGGCTCGTGGTGGGCCTGTCGATCTGGTGGAAGAAGCTTGCTCCGGACGGCCGCAACGCCAATCA
GGTCACCAGCCAGGCGCTCACCGATCTGGGCGGATCGGCGACTTTTTACGACTGCCTCGTCGAAGTCGAGCGCGTCTGA

Upstream 100 bases:

>100_bases
TTCTACGCCGAAGGCGTTTTTGGCGGGACCGTGCGGGTTAACCGGCAATTGACGTAATAGAATCTCCCATTGCTTTACCG
CTCCCCACGACGGACCGCCG

Downstream 100 bases:

>100_bases
AATACCTTCAATCGCCGAGCGGTGCTCGTCTTCTGAGGGTTCGAGGCTGCAGTCTAACCCGGCCGCTTTTCGCAAATAAC
CGAGAGGTGCCCATGCTACG

Product: putative molybdopterin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE
PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML
TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL
DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG
AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE
RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL
DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP
YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT
DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV

Sequences:

>Translated_692_residues
MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE
PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML
TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL
DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG
AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE
RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL
DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP
YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT
DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV
>Mature_692_residues
MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE
PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML
TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL
DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG
AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE
RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL
DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP
YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT
DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasm Face Of The Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI171474008, Length=755, Percent_Identity=26.887417218543, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI87081797, Length=763, Percent_Identity=27.129750982962, Blast_Score=215, Evalue=6e-57,
Organism=Escherichia coli, GI1787870, Length=768, Percent_Identity=27.6041666666667, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI3868721, Length=721, Percent_Identity=26.4909847434119, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI87081994, Length=723, Percent_Identity=24.6196403872752, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787231, Length=743, Percent_Identity=24.764468371467, Blast_Score=132, Evalue=8e-32,
Organism=Escherichia coli, GI145693196, Length=700, Percent_Identity=24.4285714285714, Blast_Score=126, Evalue=6e-30,
Organism=Escherichia coli, GI1788534, Length=320, Percent_Identity=20.625, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI3868720, Length=270, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787778, Length=298, Percent_Identity=23.489932885906, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI3868719, Length=233, Percent_Identity=25.3218884120172, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 75805; Mature: 75805

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHH
CCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PQRLTRPMKRVGRKGEGRFEPIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
DSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGMLTEFFDESELILIWGSNPIAS
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCEEEEECCCCCCC
NLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL
CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH
DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQ
HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHH
RVRGGGNAVRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRV
HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE
INMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQ
EEECCCCHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC
TDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL
CCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHCCC
DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH
FYSERLAQRGLDPLPDYLPPYESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRST
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCC
EGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVTDKAREGLVVGLSIWWKKLAP
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCC
DGRNANQVTSQALTDLGGSATFYDCLVEVERV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHH
CCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PQRLTRPMKRVGRKGEGRFEPIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
DSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGMLTEFFDESELILIWGSNPIAS
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCEEEEECCCCCCC
NLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL
CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH
DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQ
HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHH
RVRGGGNAVRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRV
HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE
INMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQ
EEECCCCHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC
TDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL
CCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHCCC
DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH
FYSERLAQRGLDPLPDYLPPYESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRST
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCC
EGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVTDKAREGLVVGLSIWWKKLAP
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCC
DGRNANQVTSQALTDLGGSATFYDCLVEVERV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: Fe; Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]