| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yoaE [H]
Identifier: 91785306
GI number: 91785306
Start: 4358089
End: 4360167
Strand: Reverse
Name: yoaE [H]
Synonym: Bxe_A0473
Alternate gene names: 91785306
Gene position: 4360167-4358089 (Counterclockwise)
Preceding gene: 91785308
Following gene: 91785305
Centisome position: 89.06
GC content: 63.64
Gene sequence:
>2079_bases ATGAATGCTCCGACTGAACACGCTCGCGCCGTGTGCCCGCACGATTGCCCCGACACCTGCGCGATGCGCGTGACGGTCGA GGCCGGTCGGGCGATCAAGGTCGTCGCCGATCCCGAGCATCCTCCAACGCAAGGCGCGCTGTGCACCAAGGTCAGCCGCT ACGCGGAGCGCGTGCATCATCCGCAGAGACTGACGCGGCCAATGAAGCGTGTCGGGCGCAAAGGCGAGGGGCGCTTTGAG CCGATCGGCTGGGACGAGGCGTTCCAGCTCGCGGCGCGTCGCCTGTCGGAAATTGCACATCGCGCGCCGGAGGCAATCCT CCCTTACAGCTATGCCGGCACAATGGGCTTGATTCAGGGCGACAGCATTGCACAACGGTTCTTCCACAAGCTCGGCGCCT CGCAACTGGATCGCACGATTTGCGCGGCCGCCGGCACAGCCGGGCTGAAGTACACCTACGGCGCGAGCCTCGGCATGCTC ACCGAGTTTTTCGACGAAAGCGAGCTCATCCTCATCTGGGGCTCGAATCCGATCGCGTCGAACCTCCATTTCTGGACGCG CGCCCAACAGGCCAAACGCCGCGGTGCACGGCTGATCGCAATCGATCCGTACCGCTCGCTGACGGCCGAAAAATGCCATC AGCACATCGCTTTGAAACCGGGCACCGACAGCGCTTTGGCGCTCGGTATGATCAACGTGTTGATCAGGGAAAATCTGCTC GATCACGCTTACATCGAAGCTCATACGTCAGGTTTTGAAGCGCTGAAAGCCCGCGCGCTTAGCTACCCGCCGTCGCGCGC TGCGGAAATCTGCGGTATTGACGAACGGGTGATCGTCGATCTCGCACGACTTTACGGTGGCACCAGAAAGGCCGCGATCC GCATGAACTACGGCCTGCAACGCGTACGTGGCGGCGGCAATGCCGTGCGCGCGATCGCTTGCCTGCCGTCGCTCACGGGT GCTTGGCGCGAGAGAGCGGGGGGCGTGTTGCTGTCGTCGGGCGGCTGGGCGCCGGTCGACTCGTATGCGTTGCAGCGTCC GGACCTGATGCCGGGTTGGCCGACCAGGACGAGCCGCGTCATCAACATGAACGGGATCGGCGACGCGCTGCTGCACAAGG GCGACGCGGCGTTCGGTCCCAAGGTCGAAGCGATCGTCGTCTACAACTCGAATCCGGTGGCTGTCGCGCCAGATTCGGAG CGAGTCGCCGCGGGTTTCGCGCGCGAAGATCTGTTCACAATCGTCCTCGAGCATTTCCAGACCGACACAGCCGACTACGC CGATCTGTTGCTGCCCGCGACAACTCAACTCGAGCACCTCGACGTGCACAAGTCGTACGGCCACACGCACGTCATGGTCA ACCTGCCGGCAATCGCGCCGGTCGGCGAAGCGCTTCCGAACACGGAGATTTTCCGCGGCATCGCGCGTCATATGGGCCTC GACGAGCCCGCGCTGTTCGAGAGCGACGAGACCGTCGCGCAGGCGGCGTTTCGCTGGCAAGACAGAACGCTCGAAGGCGT AGATTGGGAGACCCTCAAGAAGACCGGCTGGGCCAAGCTGAATCTGCCCGATGCGCCTTTCGCCGAAGGGGGGTTCCAAA CGCCGTCCGGCAAATGCGAGTTCTACAGCGAGCGCCTCGCGCAACGGGGACTCGACCCACTGCCGGACTATCTGCCTCCC TACGAATCCGCTGATGGCGCGCCGGAACTTGCCGCCCGTTATCCGCTGGCGATGATCTCGCCGCCCGCCCGCAACTTCCT GAACAGCACCTTCGTGAATATCGAAAGTCTGCGTTCGACCGAAGGCGAGCCGCATCTCGACATGCATCCGGCCGACGCGC AATCGCGGGATATCGTCGACGGCGATCAGGTGCGCATTTTTAACGATCGCGGGTCGATGCAGGCGCGCGTCCGCGTTACC GATAAAGCACGCGAGGGGCTCGTGGTGGGCCTGTCGATCTGGTGGAAGAAGCTTGCTCCGGACGGCCGCAACGCCAATCA GGTCACCAGCCAGGCGCTCACCGATCTGGGCGGATCGGCGACTTTTTACGACTGCCTCGTCGAAGTCGAGCGCGTCTGA
Upstream 100 bases:
>100_bases TTCTACGCCGAAGGCGTTTTTGGCGGGACCGTGCGGGTTAACCGGCAATTGACGTAATAGAATCTCCCATTGCTTTACCG CTCCCCACGACGGACCGCCG
Downstream 100 bases:
>100_bases AATACCTTCAATCGCCGAGCGGTGCTCGTCTTCTGAGGGTTCGAGGCTGCAGTCTAACCCGGCCGCTTTTCGCAAATAAC CGAGAGGTGCCCATGCTACG
Product: putative molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV
Sequences:
>Translated_692_residues MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV >Mature_692_residues MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMKRVGRKGEGRFE PIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQGDSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGML TEFFDESELILIWGSNPIASNLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNAVRAIACLPSLTG AWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSE RVAAGFAREDLFTIVLEHFQTDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCEFYSERLAQRGLDPLPDYLPP YESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVT DKAREGLVVGLSIWWKKLAPDGRNANQVTSQALTDLGGSATFYDCLVEVERV
Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI171474008, Length=755, Percent_Identity=26.887417218543, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI87081797, Length=763, Percent_Identity=27.129750982962, Blast_Score=215, Evalue=6e-57, Organism=Escherichia coli, GI1787870, Length=768, Percent_Identity=27.6041666666667, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI3868721, Length=721, Percent_Identity=26.4909847434119, Blast_Score=184, Evalue=2e-47, Organism=Escherichia coli, GI87081994, Length=723, Percent_Identity=24.6196403872752, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1787231, Length=743, Percent_Identity=24.764468371467, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI145693196, Length=700, Percent_Identity=24.4285714285714, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI1788534, Length=320, Percent_Identity=20.625, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI3868720, Length=270, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787778, Length=298, Percent_Identity=23.489932885906, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI3868719, Length=233, Percent_Identity=25.3218884120172, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 75805; Mature: 75805
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHH CCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC PQRLTRPMKRVGRKGEGRFEPIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC DSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGMLTEFFDESELILIWGSNPIAS HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCEEEEECCCCCCC NLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQ HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHH RVRGGGNAVRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRV HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE INMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQ EEECCCCHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC TDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL CCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHCCC DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCE CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH FYSERLAQRGLDPLPDYLPPYESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRST HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCC EGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVTDKAREGLVVGLSIWWKKLAP CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCC DGRNANQVTSQALTDLGGSATFYDCLVEVERV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNAPTEHARAVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHH CCCCCCHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC PQRLTRPMKRVGRKGEGRFEPIGWDEAFQLAARRLSEIAHRAPEAILPYSYAGTMGLIQG HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC DSIAQRFFHKLGASQLDRTICAAAGTAGLKYTYGASLGMLTEFFDESELILIWGSNPIAS HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCEEEEECCCCCCC NLHFWTRAQQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLL CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH DHAYIEAHTSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQ HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHH RVRGGGNAVRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRV HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEE INMNGIGDALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQ EEECCCCHHHHCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHC TDTADYADLLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGL CCCCHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHCCC DEPALFESDETVAQAAFRWQDRTLEGVDWETLKKTGWAKLNLPDAPFAEGGFQTPSGKCE CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH FYSERLAQRGLDPLPDYLPPYESADGAPELAARYPLAMISPPARNFLNSTFVNIESLRST HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCC EGEPHLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVTDKAREGLVVGLSIWWKKLAP CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCC DGRNANQVTSQALTDLGGSATFYDCLVEVERV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: Fe; Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]