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The map label for this gene is omlA [H]

Identifier: 91785207

GI number: 91785207

Start: 4254501

End: 4255367

Strand: Reverse

Name: omlA [H]

Synonym: Bxe_A0572

Alternate gene names: 91785207

Gene position: 4255367-4254501 (Counterclockwise)

Preceding gene: 91785209

Following gene: 229258268

Centisome position: 86.92

GC content: 65.4

Gene sequence:

>867_bases
ATGATTTCAAAATCTCAATTGATCTACCGGGGGAGCCGCATGCGGGGTACCTTGATCGCTGTTGCGACTGTCGCGGTTCT
TGCCGGATGTTCCACTTACGACAGCCTGACACAGCGTATTGCCCAAAGCATCACGCCGTACCGTATTACGGTGGTGCAAG
GCAATTTCGTCTCGAAAGAAGCGGCTGCGCAAATGCAGATCGGCCTGACCCGCGCGCAGGTCAAGCAATTGCTCGGCACG
CCGCTCCTGACCGATATGTTCCACGCGGACCGCTGGGACTACGTGTTCTATTTCAAGCGCGGCTCGACTAACGTCGTGCA
GCAGCGCGACTTCGTGATTCTCTTCGCGGGCGACCGCGTCGCCAGCTGGTCGGGTGGCGAAGATCTGCCGTCCAACCTCG
AATTGCTGGCTGAAATCGACGGCGACAAGCTGGGCAAGAAGAAGGCCGCTGCCGCCGTGGCGACCAGCGCCAGCGGCGCG
AGCGAGGCGACCGCCGCCGCGGCGCCGGTCACGCTTGACACGGTGCGCTCGCCGTCCGTCGCCGGCGCAGCCGCCGCGGC
GGTGCCGTCCACGGACGCCAACGCAGAAGCCGCACAAGCCGCCAATCGGGCGACCAATGCTGTGCAGTTGACGCCCGCGC
GTCCGTCCGTGCCCACCGCGCCGACCGCCAACGGCGGCGGCATCCCGCAGCAAAGCCCCACGGGCAATGGGCAACCGCAA
TTCCAGTTCCATCGTCCGCCGCCGCCGCAGAATCCGGGTACGGACAACAGCAATCCGGTTGGCCCGACGGGCCCGCAAAG
CAGCAACGGCGGGCCGACGTACAACACGCCGTTGACCTCTTCGCCGGCTTCGGGAACGGGCGGCTAA

Upstream 100 bases:

>100_bases
ACAATGCTGGGCTCTCATAGTAATGTGTTTTTGGCGTTCTGGTCATCTTCGATGGAATGAAACTCGCGCGGCTCGTCAGC
GGGCCCGCACGGTGAGTGAA

Downstream 100 bases:

>100_bases
TCGCGCTGTCCCTGTCTTAATGCTCGTGCTTAAGACGTATGCTCAAGACGGACGCTGCGCACGGGCAACCGCGGCGCGCG
GCGTCCGTGCGGTTCTCTGC

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MISKSQLIYRGSRMRGTLIAVATVAVLAGCSTYDSLTQRIAQSITPYRITVVQGNFVSKEAAAQMQIGLTRAQVKQLLGT
PLLTDMFHADRWDYVFYFKRGSTNVVQQRDFVILFAGDRVASWSGGEDLPSNLELLAEIDGDKLGKKKAAAAVATSASGA
SEATAAAAPVTLDTVRSPSVAGAAAAAVPSTDANAEAAQAANRATNAVQLTPARPSVPTAPTANGGGIPQQSPTGNGQPQ
FQFHRPPPPQNPGTDNSNPVGPTGPQSSNGGPTYNTPLTSSPASGTGG

Sequences:

>Translated_288_residues
MISKSQLIYRGSRMRGTLIAVATVAVLAGCSTYDSLTQRIAQSITPYRITVVQGNFVSKEAAAQMQIGLTRAQVKQLLGT
PLLTDMFHADRWDYVFYFKRGSTNVVQQRDFVILFAGDRVASWSGGEDLPSNLELLAEIDGDKLGKKKAAAAVATSASGA
SEATAAAAPVTLDTVRSPSVAGAAAAAVPSTDANAEAAQAANRATNAVQLTPARPSVPTAPTANGGGIPQQSPTGNGQPQ
FQFHRPPPPQNPGTDNSNPVGPTGPQSSNGGPTYNTPLTSSPASGTGG
>Mature_288_residues
MISKSQLIYRGSRMRGTLIAVATVAVLAGCSTYDSLTQRIAQSITPYRITVVQGNFVSKEAAAQMQIGLTRAQVKQLLGT
PLLTDMFHADRWDYVFYFKRGSTNVVQQRDFVILFAGDRVASWSGGEDLPSNLELLAEIDGDKLGKKKAAAAVATSASGA
SEATAAAAPVTLDTVRSPSVAGAAAAAVPSTDANAEAAQAANRATNAVQLTPARPSVPTAPTANGGGIPQQSPTGNGQPQ
FQFHRPPPPQNPGTDNSNPVGPTGPQSSNGGPTYNTPLTSSPASGTGG

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 29619; Mature: 29619

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKSQLIYRGSRMRGTLIAVATVAVLAGCSTYDSLTQRIAQSITPYRITVVQGNFVSKE
CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH
AAAQMQIGLTRAQVKQLLGTPLLTDMFHADRWDYVFYFKRGSTNVVQQRDFVILFAGDRV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEEECCEE
ASWSGGEDLPSNLELLAEIDGDKLGKKKAAAAVATSASGASEATAAAAPVTLDTVRSPSV
ECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCEEHECCCCCCC
AGAAAAAVPSTDANAEAAQAANRATNAVQLTPARPSVPTAPTANGGGIPQQSPTGNGQPQ
CCHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FQFHRPPPPQNPGTDNSNPVGPTGPQSSNGGPTYNTPLTSSPASGTGG
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISKSQLIYRGSRMRGTLIAVATVAVLAGCSTYDSLTQRIAQSITPYRITVVQGNFVSKE
CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH
AAAQMQIGLTRAQVKQLLGTPLLTDMFHADRWDYVFYFKRGSTNVVQQRDFVILFAGDRV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEEECCEE
ASWSGGEDLPSNLELLAEIDGDKLGKKKAAAAVATSASGASEATAAAAPVTLDTVRSPSV
ECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCEEHECCCCCCC
AGAAAAAVPSTDANAEAAQAANRATNAVQLTPARPSVPTAPTANGGGIPQQSPTGNGQPQ
CCHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FQFHRPPPPQNPGTDNSNPVGPTGPQSSNGGPTYNTPLTSSPASGTGG
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]