| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785202
Identifier: 91785202
GI number: 91785202
Start: 4248868
End: 4249377
Strand: Reverse
Name: 91785202
Synonym: Bxe_A0577
Alternate gene names: NA
Gene position: 4249377-4248868 (Counterclockwise)
Preceding gene: 91785203
Following gene: 91785201
Centisome position: 86.8
GC content: 64.71
Gene sequence:
>510_bases ATGTTGTCCGCCTGCGGCTTCCAGTTGCGCGGTCAGCAGGACTACGCATTCAAACGCCTCTTCATCGCCGGCGGTTCGCC GGCGGCGGCCGCGCGCCTGACGCGTATCGTGCAAGGCGGCAGCGACACGGTCGTGGTCACGTCGGTTGCGAATGCCGACG CCACGTTGCAGATTACCGAAGGCCGCGGCATCAACACGCTGACGCTGAATTCGCTGGGCGCGGTCGAAGAGTATGGGCTG AATCTCTCGATGACCTATTCGCTGACGGCCAAAGACGGCACGCTGCTGATTCCGTCGAGCGTGATCGCGCTGAACCGCGC GATGACCTATAGCGATCAGTTTTCGCAGGCGAAGGCCGCCGAGAGCGACATTCTCTTCGCCGATATGGAAAACGACGCGA TCGACCAGCTCTCACGCCGTCTGTCGGTCGTGCGCTCCATGCATCCGGCGCCGGGCCAGGAAGTGCCGGCGATCGTGCCG CGTGCGCCGCTGCCGCCGCCGCCTCTGTGA
Upstream 100 bases:
>100_bases GTCGCGTGCGGCGGCGCTCCTGTCCCGCTGCGGAATCTACTGCGAACCAGGAGCCAATGTGACTCGCAGATCGTTTTTGA CGCTGGCTTGCAGCGTGTTG
Downstream 100 bases:
>100_bases GCGTCGTGTTTCGTTCAATGTGCCGCACCTGTTCAACTTCGCCGATCGGTAGCCATGCAACTGCGACTTGACGCGCTCGA AGCGCATCTCGCCAAGGGAC
Product: rare lipoprotein B
Products: NA
Alternate protein names: Lipoprotein; Lipoprotein B Transmembrane; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLSACGFQLRGQQDYAFKRLFIAGGSPAAAARLTRIVQGGSDTVVVTSVANADATLQITEGRGINTLTLNSLGAVEEYGL NLSMTYSLTAKDGTLLIPSSVIALNRAMTYSDQFSQAKAAESDILFADMENDAIDQLSRRLSVVRSMHPAPGQEVPAIVP RAPLPPPPL
Sequences:
>Translated_169_residues MLSACGFQLRGQQDYAFKRLFIAGGSPAAAARLTRIVQGGSDTVVVTSVANADATLQITEGRGINTLTLNSLGAVEEYGL NLSMTYSLTAKDGTLLIPSSVIALNRAMTYSDQFSQAKAAESDILFADMENDAIDQLSRRLSVVRSMHPAPGQEVPAIVP RAPLPPPPL >Mature_169_residues MLSACGFQLRGQQDYAFKRLFIAGGSPAAAARLTRIVQGGSDTVVVTSVANADATLQITEGRGINTLTLNSLGAVEEYGL NLSMTYSLTAKDGTLLIPSSVIALNRAMTYSDQFSQAKAAESDILFADMENDAIDQLSRRLSVVRSMHPAPGQEVPAIVP RAPLPPPPL
Specific function: Unknown
COG id: COG2980
COG function: function code M; Rare lipoprotein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17892; Mature: 17892
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSACGFQLRGQQDYAFKRLFIAGGSPAAAARLTRIVQGGSDTVVVTSVANADATLQITE CCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEC GRGINTLTLNSLGAVEEYGLNLSMTYSLTAKDGTLLIPSSVIALNRAMTYSDQFSQAKAA CCCCEEEEECCCCCHHHHCCCEEEEEEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHCC ESDILFADMENDAIDQLSRRLSVVRSMHPAPGQEVPAIVPRAPLPPPPL CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MLSACGFQLRGQQDYAFKRLFIAGGSPAAAARLTRIVQGGSDTVVVTSVANADATLQITE CCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEC GRGINTLTLNSLGAVEEYGLNLSMTYSLTAKDGTLLIPSSVIALNRAMTYSDQFSQAKAA CCCCEEEEECCCCCHHHHCCCEEEEEEEEECCCEEECCCHHHHHHHHHCCCHHHHHHHCC ESDILFADMENDAIDQLSRRLSVVRSMHPAPGQEVPAIVPRAPLPPPPL CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA