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The map label for this gene is ompA [H]

Identifier: 91785192

GI number: 91785192

Start: 4227855

End: 4228658

Strand: Reverse

Name: ompA [H]

Synonym: Bxe_A0587

Alternate gene names: 91785192

Gene position: 4228658-4227855 (Counterclockwise)

Preceding gene: 91785193

Following gene: 91785190

Centisome position: 86.37

GC content: 62.44

Gene sequence:

>804_bases
ATGTCACACATGGCAGGAGCGCCGCTTCGATCGACTGAATCCCCGAAAATGAATACAACTTTTTTTAAGTCGCCGCGCAT
GCTGCTGCTCGGCGCGTGTGTGACGTTCCTTGCTGCGTGCACTACGCAGTCGGGCCCAACCTATACGCTTCACGCAGTGA
ACGTGCCGAACCAGCAGGCACCGATTTATCGGGTCAGCTGCGAGGGACTCTTCGAAAGCTCGAAGAGTTGCGTGCGTGTG
GCTGGAGAGACCTGCAAGAATCAGCCGGTGACGTGGCTCGAAGCCATCGATCGCGTAAGCGACGGCGTGCAGAAGAAGGA
TGCGCGCAATCTGACCTTCATGTGCGGCAATCCGGTTGTGGCCCAGCCGGTCCCGCAACAGGCTCCGCAGGCGGCCCCAC
AACAGCCGGTTCCGCAACCGCCGGCTGCGCAGCCGCAAGCAAAACAGGTGGCGCCGCAGGTTCGCCTACTGCTGCAAGGC
AACGCTAACTTTGCGACGGATAGCGCGGTGCTGAGCCCCATTGCAAAGAAAAACCTCGACGACTTCATGCGCGCGAATCA
GGGCGTCAACCTGCATCGCGTGATGGTGGTGGGTTATACGGACGCAACGGGTTCGGAAGCACATAACCTGAACCTCTCCC
AGGCTCGTGCCGCCGCCGTCGTGCAATACCTGCGTGACGGCGGCCTGCGCGCCGAGCAGTTCGTCGCGCGCGGACTGGGC
AGCGCCGATCCGGTGGCGTCGAATGCGACGGCCGAGGGCCGCATGCAAAACCGCCGCGTCGACGTTCGCGTGCTCGCGGA
GTAG

Upstream 100 bases:

>100_bases
TGGGTGCTTCCTACCAGTGGTAAGCGCCATGACGGACGAGGCGTGAGCCTCGTCCGTCAGCCTGGTCTGGTTTGACTTAA
CTGCAAGCGCGCTCCGGTCC

Downstream 100 bases:

>100_bases
ATAGCGGCAGCACACGTTGCCTGACCACTAAGGCCTGCCATCGCGCAGGCCTTTTTCATCTCCAAAGCATCAACTCTCGC
CGTCGACCCTCAAGCGTCCG

Product: OmpA family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSHMAGAPLRSTESPKMNTTFFKSPRMLLLGACVTFLAACTTQSGPTYTLHAVNVPNQQAPIYRVSCEGLFESSKSCVRV
AGETCKNQPVTWLEAIDRVSDGVQKKDARNLTFMCGNPVVAQPVPQQAPQAAPQQPVPQPPAAQPQAKQVAPQVRLLLQG
NANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQARAAAVVQYLRDGGLRAEQFVARGLG
SADPVASNATAEGRMQNRRVDVRVLAE

Sequences:

>Translated_267_residues
MSHMAGAPLRSTESPKMNTTFFKSPRMLLLGACVTFLAACTTQSGPTYTLHAVNVPNQQAPIYRVSCEGLFESSKSCVRV
AGETCKNQPVTWLEAIDRVSDGVQKKDARNLTFMCGNPVVAQPVPQQAPQAAPQQPVPQPPAAQPQAKQVAPQVRLLLQG
NANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQARAAAVVQYLRDGGLRAEQFVARGLG
SADPVASNATAEGRMQNRRVDVRVLAE
>Mature_266_residues
SHMAGAPLRSTESPKMNTTFFKSPRMLLLGACVTFLAACTTQSGPTYTLHAVNVPNQQAPIYRVSCEGLFESSKSCVRVA
GETCKNQPVTWLEAIDRVSDGVQKKDARNLTFMCGNPVVAQPVPQQAPQAAPQQPVPQPPAAQPQAKQVAPQVRLLLQGN
ANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQARAAAVVQYLRDGGLRAEQFVARGLGS
ADPVASNATAEGRMQNRRVDVRVLAE

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=102, Percent_Identity=41.1764705882353, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28620; Mature: 28489

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHMAGAPLRSTESPKMNTTFFKSPRMLLLGACVTFLAACTTQSGPTYTLHAVNVPNQQA
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
PIYRVSCEGLFESSKSCVRVAGETCKNQPVTWLEAIDRVSDGVQKKDARNLTFMCGNPVV
CEEEEECCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
AQPVPQQAPQAAPQQPVPQPPAAQPQAKQVAPQVRLLLQGNANFATDSAVLSPIAKKNLD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCHH
DFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQARAAAVVQYLRDGGLRAEQFVARGLG
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
SADPVASNATAEGRMQNRRVDVRVLAE
CCCCCCCCCCCCCHHHCCEEEEEEECC
>Mature Secondary Structure 
SHMAGAPLRSTESPKMNTTFFKSPRMLLLGACVTFLAACTTQSGPTYTLHAVNVPNQQA
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
PIYRVSCEGLFESSKSCVRVAGETCKNQPVTWLEAIDRVSDGVQKKDARNLTFMCGNPVV
CEEEEECCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
AQPVPQQAPQAAPQQPVPQPPAAQPQAKQVAPQVRLLLQGNANFATDSAVLSPIAKKNLD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCHH
DFMRANQGVNLHRVMVVGYTDATGSEAHNLNLSQARAAAVVQYLRDGGLRAEQFVARGLG
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
SADPVASNATAEGRMQNRRVDVRVLAE
CCCCCCCCCCCCCHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]