| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pgk [H]
Identifier: 91785091
GI number: 91785091
Start: 4123849
End: 4125042
Strand: Reverse
Name: pgk [H]
Synonym: Bxe_A0689
Alternate gene names: 91785091
Gene position: 4125042-4123849 (Counterclockwise)
Preceding gene: 91785092
Following gene: 91785090
Centisome position: 84.26
GC content: 63.82
Gene sequence:
>1194_bases ATGAACAAGGTATTGCGTCTCTCCGATCTGATCGCCGAAGGCAAGCTATCCGGCAAACGCGTGTTCATCCGCGCCGATCT GAACGTGCCGCAGGACGATCAAGGCAACATCACCGAAGACACCCGTATCCGCGCTTCCGTGCCGGCCATCAAGGCCGCGC TCGACGCGGGCGCCGCCGTGATGGTCACGTCGCACCTGGGCCGTCCCACAGAGGGTGATTTCAAGCCTGAAGACTCGCTT GCGCCGGTCGCGAAACGTCTGGCCGAACTGCTCGGCCGCGAGGTGCCGCTGGTGGCGAACTGGGTCGAAAACGGCGTGAA CGTCGCGCCGGGCTCGGTCGTGCTGCTGGAAAACTGCCGCGTCAACAAGGGCGAAAAGAAAGATTCCGACGAGCTCGCGC AGAAAATGGCGAAGCTCTGCGACATCTACGTGAACGACGCATTCGGCACCGCGCACCGCGCCGAAGCCACCACGCACGGT ATTGCCAGATACGCGCCGGTGGCGTGCGCCGGCCCGCTGCTCGCGGCCGAACTCGAAGCGCTCGGCAAGGCGCTGGGCGC GCCGAAGCGTCCGCTGGTGGCGATCGTCGCCGGCTCGAAGGTGTCGACCAAGCTGACCATTCTGAAGTCGCTCGCCGACA AGGTCGATCAACTGATCGTGGGCGGCGGCATTGCCAACACGTTCATGCTGGCCGCGGGCCTGAAGATCGGCAAGTCGCTC GCCGAAGCCGATCTGGTGAACGAAGCCAAAGCCATCATCGACGCGGCGAAAGCCCGCGGCGCCTCGGTGCCGATCCCGAC CGACGTGGTCACGGCGAAAGAGTTTTCCCCGACCGCCAAGGCAGAAGTCAAAGCAGTCGCCGACGTTCAGGACGACGACC TGATCCTCGACATCGGGCCGGAAACGGCCAAAGTGCTCGCCGCGCAACTGGAAAAGGCCGGCACGATCGTGTGGAACGGT CCGGTCGGCGTGTTCGAATTCGACCAGTTTGGCAACGGCACGAAGACGCTGGCGGAGGCTATCGCCAAATCGTCGGCGTT CTCGATTGCCGGCGGCGGCGATACGCTTGCTGCGATCGCCAAGTACGGCATCCACGACAAGGTCAGCTATATCTCGACGG GCGGCGGCGCTTTCCTCGAATTCCTCGAAGGCAAGAAGCTGCCGGCGGTCGAAGTTCTGGAATCGCGGGCTTAA
Upstream 100 bases:
>100_bases TCAGTGGAACCGCTGCCGTGCCTGAGCGCTGGAGTTCACCGCGCCCGAGTGCCGCGCGCCGTCCGCCACCGCCTTCTCAT CAACTCGCACACACACGCCC
Downstream 100 bases:
>100_bases CGTGGCGACGCGCTCCCCAACGGCAAAGTCTGCGAATGCGCGTGGCGGCAAGCCGCGCAACAGCGCAGCGGCATCGGCAG GGGAGCGCGCGGCGCGCTCC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNKVLRLSDLIAEGKLSGKRVFIRADLNVPQDDQGNITEDTRIRASVPAIKAALDAGAAVMVTSHLGRPTEGDFKPEDSL APVAKRLAELLGREVPLVANWVENGVNVAPGSVVLLENCRVNKGEKKDSDELAQKMAKLCDIYVNDAFGTAHRAEATTHG IARYAPVACAGPLLAAELEALGKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSL AEADLVNEAKAIIDAAKARGASVPIPTDVVTAKEFSPTAKAEVKAVADVQDDDLILDIGPETAKVLAAQLEKAGTIVWNG PVGVFEFDQFGNGTKTLAEAIAKSSAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLESRA
Sequences:
>Translated_397_residues MNKVLRLSDLIAEGKLSGKRVFIRADLNVPQDDQGNITEDTRIRASVPAIKAALDAGAAVMVTSHLGRPTEGDFKPEDSL APVAKRLAELLGREVPLVANWVENGVNVAPGSVVLLENCRVNKGEKKDSDELAQKMAKLCDIYVNDAFGTAHRAEATTHG IARYAPVACAGPLLAAELEALGKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSL AEADLVNEAKAIIDAAKARGASVPIPTDVVTAKEFSPTAKAEVKAVADVQDDDLILDIGPETAKVLAAQLEKAGTIVWNG PVGVFEFDQFGNGTKTLAEAIAKSSAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLESRA >Mature_397_residues MNKVLRLSDLIAEGKLSGKRVFIRADLNVPQDDQGNITEDTRIRASVPAIKAALDAGAAVMVTSHLGRPTEGDFKPEDSL APVAKRLAELLGREVPLVANWVENGVNVAPGSVVLLENCRVNKGEKKDSDELAQKMAKLCDIYVNDAFGTAHRAEATTHG IARYAPVACAGPLLAAELEALGKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSL AEADLVNEAKAIIDAAKARGASVPIPTDVVTAKEFSPTAKAEVKAVADVQDDDLILDIGPETAKVLAAQLEKAGTIVWNG PVGVFEFDQFGNGTKTLAEAIAKSSAFSIAGGGDTLAAIAKYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLESRA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=406, Percent_Identity=42.3645320197044, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI4505763, Length=419, Percent_Identity=40.8114558472554, Blast_Score=276, Evalue=2e-74, Organism=Escherichia coli, GI1789294, Length=394, Percent_Identity=62.4365482233503, Blast_Score=464, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17508823, Length=407, Percent_Identity=46.1916461916462, Blast_Score=309, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6319857, Length=408, Percent_Identity=43.8725490196078, Blast_Score=286, Evalue=4e-78, Organism=Drosophila melanogaster, GI17136394, Length=406, Percent_Identity=41.1330049261084, Blast_Score=264, Evalue=7e-71, Organism=Drosophila melanogaster, GI24581203, Length=408, Percent_Identity=39.4607843137255, Blast_Score=246, Evalue=2e-65,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41275; Mature: 41275
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVLRLSDLIAEGKLSGKRVFIRADLNVPQDDQGNITEDTRIRASVPAIKAALDAGAAV CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEE MVTSHLGRPTEGDFKPEDSLAPVAKRLAELLGREVPLVANWVENGVNVAPGSVVLLENCR EEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCC VNKGEKKDSDELAQKMAKLCDIYVNDAFGTAHRAEATTHGIARYAPVACAGPLLAAELEA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH LGKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSL HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEADLVNEAKAIIDAAKARGASVPIPTDVVTAKEFSPTAKAEVKAVADVQDDDLILDIGP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHEECCCCCCEEEEECC ETAKVLAAQLEKAGTIVWNGPVGVFEFDQFGNGTKTLAEAIAKSSAFSIAGGGDTLAAIA HHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHH KYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLESRA HHCCCCCHHEEECCCHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MNKVLRLSDLIAEGKLSGKRVFIRADLNVPQDDQGNITEDTRIRASVPAIKAALDAGAAV CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCEE MVTSHLGRPTEGDFKPEDSLAPVAKRLAELLGREVPLVANWVENGVNVAPGSVVLLENCR EEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCC VNKGEKKDSDELAQKMAKLCDIYVNDAFGTAHRAEATTHGIARYAPVACAGPLLAAELEA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH LGKALGAPKRPLVAIVAGSKVSTKLTILKSLADKVDQLIVGGGIANTFMLAAGLKIGKSL HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AEADLVNEAKAIIDAAKARGASVPIPTDVVTAKEFSPTAKAEVKAVADVQDDDLILDIGP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHEECCCCCCEEEEECC ETAKVLAAQLEKAGTIVWNGPVGVFEFDQFGNGTKTLAEAIAKSSAFSIAGGGDTLAAIA HHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHH KYGIHDKVSYISTGGGAFLEFLEGKKLPAVEVLESRA HHCCCCCHHEEECCCHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]