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The map label for this gene is qseB [H]

Identifier: 91785081

GI number: 91785081

Start: 4110985

End: 4111647

Strand: Reverse

Name: qseB [H]

Synonym: Bxe_A0699

Alternate gene names: 91785081

Gene position: 4111647-4110985 (Counterclockwise)

Preceding gene: 91785085

Following gene: 91785080

Centisome position: 83.98

GC content: 67.27

Gene sequence:

>663_bases
ATGCGCATCTTGCTAGTCGAAGACGACCGGATGATCGCTGAAGGCGTGCGCAAGGCGCTGCGCGGCGAAGGCTTCGCGGT
CGACTGGGTGGAAGACGGGGAGTCTGCGCTCAGCGCGGCGGCGAGCCAGCCTTACGATCTCGTGCTGCTCGACCTGGGCC
TGCCCAGGCGCGACGGTCTCGACGTGCTGCGCACGCTGCGCGCGCGCGGCCACGCGTTGCCGGTGCTGATCGTCACCGCA
CGCGATGCCGTGGCGGATCGCGTCAAAGGCCTCGACGCCGGCGCCGACGACTACCTCGTCAAACCTTTCGATCTCGACGA
ACTCGGCGCCCGCATGCGCGCGCTGATCCGCCGTCAATCCGGGCGCAGCGATTCGACCATCCGCCTCGGCAACCTGACGC
TCGATCCCGCCTCGCATCAGGTCACGCTCGAAGGCGCGCCGGTCGCGTTGTCGGCGCGCGAATTCGCGCTGCTCGAGGCG
CTGCTCGCGCGTCCCGGCGCCGTGCTCTCGAAGAGCCAGCTCGAGGAAAAAATGTACGGCTGGGGCGAAGAGATCGGCAG
CAATACCGTCGAGGTCTACATTCACGCGCTGCGCAAGAAACTCGGCGCGGATCTGATCCGCAACGTACGCGGTCTCGGCT
ACATGATCGCGAAGGACGCCTGA

Upstream 100 bases:

>100_bases
GACATGCCGCCGGGCTGCGGTGGAAAATGCGCCACGCGCCGCACATGCCGGGGACGGGCGCTAGAATGCGGCATCATCGA
ACGATTCGGAACGGATAACC

Downstream 100 bases:

>100_bases
GCCGATGCGTTCGATCCGCCGTCAATTGCTGGTGTGGCTGCTGGCGCTGGTGCTGCTCGGCGTCGGCATCGCGGGTTGGC
TGATCTACCGGCAGGCGCTT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRILLVEDDRMIAEGVRKALRGEGFAVDWVEDGESALSAAASQPYDLVLLDLGLPRRDGLDVLRTLRARGHALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQSGRSDSTIRLGNLTLDPASHQVTLEGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGADLIRNVRGLGYMIAKDA

Sequences:

>Translated_220_residues
MRILLVEDDRMIAEGVRKALRGEGFAVDWVEDGESALSAAASQPYDLVLLDLGLPRRDGLDVLRTLRARGHALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQSGRSDSTIRLGNLTLDPASHQVTLEGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGADLIRNVRGLGYMIAKDA
>Mature_220_residues
MRILLVEDDRMIAEGVRKALRGEGFAVDWVEDGESALSAAASQPYDLVLLDLGLPRRDGLDVLRTLRARGHALPVLIVTA
RDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQSGRSDSTIRLGNLTLDPASHQVTLEGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGADLIRNVRGLGYMIAKDA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=52.2935779816514, Blast_Score=231, Evalue=2e-62,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=45.662100456621, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=40.3669724770642, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.4615384615385, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=41.0958904109589, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=38.1165919282511, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=37.8995433789954, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=33.4782608695652, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=36.6812227074236, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=33.1858407079646, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=34.070796460177, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=28.8793103448276, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=28.0851063829787, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788550, Length=160, Percent_Identity=31.875, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1790437, Length=154, Percent_Identity=35.7142857142857, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790299, Length=134, Percent_Identity=35.8208955223881, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788713, Length=92, Percent_Identity=36.9565217391304, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994928, Length=121, Percent_Identity=35.5371900826446, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787487, Length=108, Percent_Identity=34.2592592592593, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=176, Percent_Identity=27.8409090909091, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23953; Mature: 23953

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDRMIAEGVRKALRGEGFAVDWVEDGESALSAAASQPYDLVLLDLGLPRRDGL
CEEEEECCCHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCH
DVLRTLRARGHALPVLIVTARDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQS
HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRSDSTIRLGNLTLDPASHQVTLEGAPVALSAREFALLEALLARPGAVLSKSQLEEKMYG
CCCCCEEEECCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WGEEIGSNTVEVYIHALRKKLGADLIRNVRGLGYMIAKDA
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure
MRILLVEDDRMIAEGVRKALRGEGFAVDWVEDGESALSAAASQPYDLVLLDLGLPRRDGL
CEEEEECCCHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCH
DVLRTLRARGHALPVLIVTARDAVADRVKGLDAGADDYLVKPFDLDELGARMRALIRRQS
HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRSDSTIRLGNLTLDPASHQVTLEGAPVALSAREFALLEALLARPGAVLSKSQLEEKMYG
CCCCCEEEECCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
WGEEIGSNTVEVYIHALRKKLGADLIRNVRGLGYMIAKDA
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]