| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is fghA [C]
Identifier: 91785066
GI number: 91785066
Start: 4091121
End: 4091978
Strand: Reverse
Name: fghA [C]
Synonym: Bxe_A0714
Alternate gene names: 91785066
Gene position: 4091978-4091121 (Counterclockwise)
Preceding gene: 91785067
Following gene: 91785061
Centisome position: 83.58
GC content: 66.2
Gene sequence:
>858_bases ATGGCGATGCTTGAACTTCTGTCGTCGCACGCCTGTCACGGCGGCGAGCAGCGCATCTATCGGCACGACTCGCAGACCAT CGGCCTGCCGATGCGCTTCTCCATCTATCTACCGCCGCAGGCCTTGCAGGCCAATGCGAACGTGCCCGCGCTGTTCTACC TCGCGGGTCTCACGTGCACGGAAGAGACGTTTCCGGTCAAAGCCGGCGCGCAGCGCTTCGCGGCGCAGCACGGCATTGCG CTCATCGCGCCGGACACCAGTCCGCGCGGTGCGGGCGTGCCGGGTGAAAGCGCGGCGTGGGACTTCGGCGTGGGCGCGGG CTTTTACGTCGACGCCACGCAGCAGCCGTGGGCGCAGCACTATCGCATGTACTCGTACGTGCGTGACGAACTGCGCGAAA CGGTGCTCGCGAATCTGCCGGTAGACGGCGCGCGTCTCGGCATCTTCGGGCATTCGATGGGCGGTCACGGCGCGTTGATG CTGGCGCTGCGCAATCCGGAGATCTATCGGTCGGTATCGGCGTTCGCGCCGATCGCCGCGCCGACGCGTTGCCCGTGGGG TGAGAAAGCGTTCAGCGGTTATCTGGGCGCAGACCGCGAAGCGTGGAAGCAGTACGACGCGAGCGAGCTGGTCGCGCAGG CGTCGCGCAAGTTTGCGGAGGGGATTCTGGTGGATCAGGGCCTCGCGGATCAGTTCCTCGCGGAGCAACTCAATCCGGAC GTGTTCGAAGCCGCCTGCCAGGCCGCGGGTCAGCCGCTGACGCTGCGCCGGCACGCGGGGTACGACCACGGCTACTATTT CATCTCCACGTTCATCGAGGATCATCTCGCGCATCACGCGAAGGTGCTGCTCGGCTGA
Upstream 100 bases:
>100_bases TGCCGCTCGAACGCATCAACGAAGGCTTCGATCTGATGAAGAAGGGCGAGTCGATCCGCTCGGTCGTGCTGTACTAATCC AATGCGGCACAACGAGGAGC
Downstream 100 bases:
>100_bases AGTCTTTCGCAGGGAGAAGGCGGCGTGCGGATGCTCCGCCGCCTTCGTCCTCGTTTTCGTCTTGCTTCAACGCCGTTTCA ACAAACTCCCGCCGTACACC
Product: S-formylglutathione hydrolase (FghA)
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MAMLELLSSHACHGGEQRIYRHDSQTIGLPMRFSIYLPPQALQANANVPALFYLAGLTCTEETFPVKAGAQRFAAQHGIA LIAPDTSPRGAGVPGESAAWDFGVGAGFYVDATQQPWAQHYRMYSYVRDELRETVLANLPVDGARLGIFGHSMGGHGALM LALRNPEIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKQYDASELVAQASRKFAEGILVDQGLADQFLAEQLNPD VFEAACQAAGQPLTLRRHAGYDHGYYFISTFIEDHLAHHAKVLLG
Sequences:
>Translated_285_residues MAMLELLSSHACHGGEQRIYRHDSQTIGLPMRFSIYLPPQALQANANVPALFYLAGLTCTEETFPVKAGAQRFAAQHGIA LIAPDTSPRGAGVPGESAAWDFGVGAGFYVDATQQPWAQHYRMYSYVRDELRETVLANLPVDGARLGIFGHSMGGHGALM LALRNPEIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKQYDASELVAQASRKFAEGILVDQGLADQFLAEQLNPD VFEAACQAAGQPLTLRRHAGYDHGYYFISTFIEDHLAHHAKVLLG >Mature_284_residues AMLELLSSHACHGGEQRIYRHDSQTIGLPMRFSIYLPPQALQANANVPALFYLAGLTCTEETFPVKAGAQRFAAQHGIAL IAPDTSPRGAGVPGESAAWDFGVGAGFYVDATQQPWAQHYRMYSYVRDELRETVLANLPVDGARLGIFGHSMGGHGALML ALRNPEIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKQYDASELVAQASRKFAEGILVDQGLADQFLAEQLNPDV FEAACQAAGQPLTLRRHAGYDHGYYFISTFIEDHLAHHAKVLLG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=281, Percent_Identity=55.8718861209964, Blast_Score=335, Evalue=3e-92, Organism=Escherichia coli, GI1786551, Length=280, Percent_Identity=50.3571428571429, Blast_Score=295, Evalue=2e-81, Organism=Escherichia coli, GI1788477, Length=281, Percent_Identity=53.3807829181495, Blast_Score=292, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=50.3571428571429, Blast_Score=286, Evalue=7e-78, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=38.8513513513513, Blast_Score=216, Evalue=3e-57, Organism=Drosophila melanogaster, GI45551932, Length=282, Percent_Identity=52.8368794326241, Blast_Score=307, Evalue=6e-84, Organism=Drosophila melanogaster, GI24648347, Length=282, Percent_Identity=52.8368794326241, Blast_Score=306, Evalue=8e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31066; Mature: 30935
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLELLSSHACHGGEQRIYRHDSQTIGLPMRFSIYLPPQALQANANVPALFYLAGLTCT CHHHHHHHHHCCCCCHHHHEECCCCEECCCEEEEEEECHHHHHCCCCCCEEEEEECCEEC EETFPVKAGAQRFAAQHGIALIAPDTSPRGAGVPGESAAWDFGVGAGFYVDATQQPWAQH CCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHH YRMYSYVRDELRETVLANLPVDGARLGIFGHSMGGHGALMLALRNPEIYRSVSAFAPIAA HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCC PTRCPWGEKAFSGYLGADREAWKQYDASELVAQASRKFAEGILVDQGLADQFLAEQLNPD CCCCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH VFEAACQAAGQPLTLRRHAGYDHGYYFISTFIEDHLAHHAKVLLG HHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AMLELLSSHACHGGEQRIYRHDSQTIGLPMRFSIYLPPQALQANANVPALFYLAGLTCT HHHHHHHHHCCCCCHHHHEECCCCEECCCEEEEEEECHHHHHCCCCCCEEEEEECCEEC EETFPVKAGAQRFAAQHGIALIAPDTSPRGAGVPGESAAWDFGVGAGFYVDATQQPWAQH CCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHH YRMYSYVRDELRETVLANLPVDGARLGIFGHSMGGHGALMLALRNPEIYRSVSAFAPIAA HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCC PTRCPWGEKAFSGYLGADREAWKQYDASELVAQASRKFAEGILVDQGLADQFLAEQLNPD CCCCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH VFEAACQAAGQPLTLRRHAGYDHGYYFISTFIEDHLAHHAKVLLG HHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]