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The map label for this gene is ycjN [C]

Identifier: 91785060

GI number: 91785060

Start: 4085278

End: 4086600

Strand: Reverse

Name: ycjN [C]

Synonym: Bxe_A0720

Alternate gene names: 91785060

Gene position: 4086600-4085278 (Counterclockwise)

Preceding gene: 91785061

Following gene: 91785059

Centisome position: 83.47

GC content: 61.83

Gene sequence:

>1323_bases
ATGAAGCCAGCCCTCAAATCCACGCTAAAGGCGGTCAGTGCCGGCGCTGTCGCATGCTTTGCATTGAACGCGTCGGCGGC
CACGGTGACGATCGCCACGCTGAACAATCCGGACATGATCGAGCTGAAGAAGCTCTCGCCCGAATTCGAAAAGGCGAATC
CGGACATCAAGCTGAACTGGGTGATTCTCGAAGAAAACGTGCTGCGTCAGCGCGCCACCACCGACATCACGACCGGCAGC
GGCCAGTTCGACGTGATGACGATCGGCGCGTACGAAACGCCGCAATGGGGCAAGCGTGGCTGGCTCACGCCGCTCACCAA
TCTGCCCGCCGATTACGATCTGAACGACGTCGTGAAGACCGCCCGCGATGGCCTCTCTAGCGGCGGCCAGTTGTATGCGC
TGCCGTTCTACGTCGAAAGCTCGATGACGTATTACCGCAAAGACCTGTTCGCGGCCAAAGGTCTGAAGATGCCCGATCAG
CCCACTTACGACCAGATCGCGCAATTCGCCGACAAGCTTACCGACAAGGCCAACGGCATTTACGGCATCTGCCTGCGCGG
CAAGGCGGGCTGGGGCGAGAACATGGCTTACGGCACGACGGTGGTGAATACCTTCGGCGGCCGCTGGTTCGACGAGAAGT
GGAACGCGCAGCTCACCTCGCCGGAATGGAAGAAGGCGATCACCTTCTACGTCAACCTGCTGAAGAAAGACGGCCCTCCG
GGAGCGAGCTCGAACGGCTTCAACGAGAATCTCACGCTGATGTCGTCCGGCAAGTGCGCGATGTGGATCGACGCGACGGT
CGCGGCCGGCATGCTCTACAACAAGCAGCAATCGCAGATCGCCGACAAGGTGGGGTTTGCCGCGGCGCCGATCGCGGTCA
CGCCGAAGGGATCGCACTGGCTATGGGCCTGGGCGCTGGCGATTCCGAAATCGTCGAAGCAGACCGACGCGGCGAAGAAG
TTCATTACGTGGGCCACGTCGAAGCAGTACATTGAACTGGTCGCGAAGGACGAAGGCTGGGCCTCGGTGCCGCCGGGAAC
GCGTCAATCCACGTACGCTCGCCCCGAGTACAAGCAAGCCGCGCCGTTCGGCGACTTCGTGCTGAAGGCGATCGAAACGG
CAGATCCGGATCATCCGACGCTCAAGCCGGTGCCGTACACCGGTGTGCAGTTCGTCGGGATTCCTGAGTTCCAGTCGTTC
GGCACGGTGGTCGGTCAGAGCATCTCCGGTGCGATTGCCGGTCAGATGACGGTCGACCAGGCGCTGGCAGCGGGCAACGC
CACGGCGGATCGTGCGGTGAAGCAGGCCGGCTACCAGAAGTAA

Upstream 100 bases:

>100_bases
AATGTCGACGGCGGCAACTGGATGAGTTGAACCCGCGCCGTTCATCGTCATTTTCGTAGAACAAACGCTGCACTACATAA
CGTACGAGAAAGGAGACAAC

Downstream 100 bases:

>100_bases
GCCACTCGAGTTACGTGGCACGCGCCGGCTGACGCCCGTCAGCCGGCCCACGCAGCACAGCGGGCCGTCTCCGCCTGCGC
ATGCGCCGCGACATCGCAGG

Product: ABC sugar transporter, periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKPALKSTLKAVSAGAVACFALNASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNWVILEENVLRQRATTDITTGS
GQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKTARDGLSSGGQLYALPFYVESSMTYYRKDLFAAKGLKMPDQ
PTYDQIAQFADKLTDKANGIYGICLRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAITFYVNLLKKDGPP
GASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPIAVTPKGSHWLWAWALAIPKSSKQTDAAKK
FITWATSKQYIELVAKDEGWASVPPGTRQSTYARPEYKQAAPFGDFVLKAIETADPDHPTLKPVPYTGVQFVGIPEFQSF
GTVVGQSISGAIAGQMTVDQALAAGNATADRAVKQAGYQK

Sequences:

>Translated_440_residues
MKPALKSTLKAVSAGAVACFALNASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNWVILEENVLRQRATTDITTGS
GQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKTARDGLSSGGQLYALPFYVESSMTYYRKDLFAAKGLKMPDQ
PTYDQIAQFADKLTDKANGIYGICLRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAITFYVNLLKKDGPP
GASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPIAVTPKGSHWLWAWALAIPKSSKQTDAAKK
FITWATSKQYIELVAKDEGWASVPPGTRQSTYARPEYKQAAPFGDFVLKAIETADPDHPTLKPVPYTGVQFVGIPEFQSF
GTVVGQSISGAIAGQMTVDQALAAGNATADRAVKQAGYQK
>Mature_440_residues
MKPALKSTLKAVSAGAVACFALNASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNWVILEENVLRQRATTDITTGS
GQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKTARDGLSSGGQLYALPFYVESSMTYYRKDLFAAKGLKMPDQ
PTYDQIAQFADKLTDKANGIYGICLRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAITFYVNLLKKDGPP
GASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPIAVTPKGSHWLWAWALAIPKSSKQTDAAKK
FITWATSKQYIELVAKDEGWASVPPGTRQSTYARPEYKQAAPFGDFVLKAIETADPDHPTLKPVPYTGVQFVGIPEFQSF
GTVVGQSISGAIAGQMTVDQALAAGNATADRAVKQAGYQK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47721; Mature: 47721

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPALKSTLKAVSAGAVACFALNASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNW
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHHCCCCEEEEE
VILEENVLRQRATTDITTGSGQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKT
EEECCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHH
ARDGLSSGGQLYALPFYVESSMTYYRKDLFAAKGLKMPDQPTYDQIAQFADKLTDKANGI
HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCE
YGICLRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAITFYVNLLKKDGPP
EEEEEECCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
GASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPIAVTPKGSHW
CCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCE
LWAWALAIPKSSKQTDAAKKFITWATSKQYIELVAKDEGWASVPPGTRQSTYARPEYKQA
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
APFGDFVLKAIETADPDHPTLKPVPYTGVQFVGIPEFQSFGTVVGQSISGAIAGQMTVDQ
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHCCHHHHH
ALAAGNATADRAVKQAGYQK
HHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKPALKSTLKAVSAGAVACFALNASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNW
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHHCCCCEEEEE
VILEENVLRQRATTDITTGSGQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKT
EEECCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHH
ARDGLSSGGQLYALPFYVESSMTYYRKDLFAAKGLKMPDQPTYDQIAQFADKLTDKANGI
HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCE
YGICLRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAITFYVNLLKKDGPP
EEEEEECCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
GASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPIAVTPKGSHW
CCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCE
LWAWALAIPKSSKQTDAAKKFITWATSKQYIELVAKDEGWASVPPGTRQSTYARPEYKQA
EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
APFGDFVLKAIETADPDHPTLKPVPYTGVQFVGIPEFQSFGTVVGQSISGAIAGQMTVDQ
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHCCHHHHH
ALAAGNATADRAVKQAGYQK
HHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]