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The map label for this gene is ycjO [C]

Identifier: 91785059

GI number: 91785059

Start: 4084177

End: 4085112

Strand: Reverse

Name: ycjO [C]

Synonym: Bxe_A0721

Alternate gene names: 91785059

Gene position: 4085112-4084177 (Counterclockwise)

Preceding gene: 91785060

Following gene: 91785058

Centisome position: 83.44

GC content: 58.12

Gene sequence:

>936_bases
ATGCGTCCTTTGCGCCTGCCTCTCATGCATGCCCATCCCCAGACAGAAAAAGAACGCGAAACTCGCAAGGCCAATTCCGC
CCGCTGGCTAGTCTCGCCGTCGGTCGCGGTGTTGGTGCTGTGGATGGCGATTCCGCTCGCGATGACGATCTGGTTTTCGT
TCTCGCGCTATAACCTGTTGAACCCGGACCTCAAGGGCTTCGCGGGTTTCGACAACTATAAGTATCTGGCCAGCGATCCG
TCGTTCGGCCCTTCGATCGGACACACGCTGGAACTGATCATCTCGGTGCTTCTGATCACGGTGGTCGGCGGCGTGCTGAT
GGCGATCCTGTTCGATCGCAAGTTCTACGGGCAGGGTATCGCGCGGCTGCTCGCCATTGCGCCGTTCTTCGTGATGCCGA
CTGTGAGCGCGTTGATCTGGAAGAACATGATCCTGCATCCGGTGTATGGCCTGATCGCGCAGGGCATGCGTGCGATGGGC
ATGACGCCGATCGACTGGTTCGCTGAATATCCGCTCTTTGCCGTGATCATGATCGTTGCGTGGCAGTGGCTGCCATTTGC
TTTCCTGATTCTGTTCACAGCGATCCAGTCGCTCGATCAGGAGCAGAAGGAAGCAGCGCGCATCGACGGTGCGGGTCCGT
TCTCGATGTTTTTCTACATCACGCTGCCTCACCTGAAACGGGCAATCGCGGTAGTGGTGATGATGGAAACGATTTTCCTG
CTGTCGATCTTCGCCGAAATCTATACGACCACGGGCGGCGGTCCGGGCACCGCGACCACCAACCTGTCGTACCTGATCTA
TTCGCTGGGCCTGCAACAGTTCGACGTCGGTCTCGCCTCCGCGGGCGGCATTCTCGCTGTCGTGCTGGCCAATATCGTGT
CGTTCTTCCTCGTGCGGATGCTCGCGAAGAACCTGAAAGGGGAGTACGAAAAATGA

Upstream 100 bases:

>100_bases
CGTCTCCGCCTGCGCATGCGCCGCGACATCGCAGGGTGTCGTCGCGGGTTTCATGCGATTCCAGGCAGCGGCTCGCGCAT
TACCGAACAGGTGGTCAATC

Downstream 100 bases:

>100_bases
GCCATGTCGCCTCCAACCCGGTGTCGAGTTCGACTGCCATGACCGTGCCGGCGAAGTCGCCGTTCGCCGCGATTCGCCGC
GCCATTCCCGGCGTGATCGC

Product: ABC sugar transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRPLRLPLMHAHPQTEKERETRKANSARWLVSPSVAVLVLWMAIPLAMTIWFSFSRYNLLNPDLKGFAGFDNYKYLASDP
SFGPSIGHTLELIISVLLITVVGGVLMAILFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLIAQGMRAMG
MTPIDWFAEYPLFAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPFSMFFYITLPHLKRAIAVVVMMETIFL
LSIFAEIYTTTGGGPGTATTNLSYLIYSLGLQQFDVGLASAGGILAVVLANIVSFFLVRMLAKNLKGEYEK

Sequences:

>Translated_311_residues
MRPLRLPLMHAHPQTEKERETRKANSARWLVSPSVAVLVLWMAIPLAMTIWFSFSRYNLLNPDLKGFAGFDNYKYLASDP
SFGPSIGHTLELIISVLLITVVGGVLMAILFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLIAQGMRAMG
MTPIDWFAEYPLFAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPFSMFFYITLPHLKRAIAVVVMMETIFL
LSIFAEIYTTTGGGPGTATTNLSYLIYSLGLQQFDVGLASAGGILAVVLANIVSFFLVRMLAKNLKGEYEK
>Mature_311_residues
MRPLRLPLMHAHPQTEKERETRKANSARWLVSPSVAVLVLWMAIPLAMTIWFSFSRYNLLNPDLKGFAGFDNYKYLASDP
SFGPSIGHTLELIISVLLITVVGGVLMAILFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLIAQGMRAMG
MTPIDWFAEYPLFAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPFSMFFYITLPHLKRAIAVVVMMETIFL
LSIFAEIYTTTGGGPGTATTNLSYLIYSLGLQQFDVGLASAGGILAVVLANIVSFFLVRMLAKNLKGEYEK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=281, Percent_Identity=29.8932384341637, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789861, Length=302, Percent_Identity=26.158940397351, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790465, Length=228, Percent_Identity=29.3859649122807, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34642; Mature: 34642

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLRLPLMHAHPQTEKERETRKANSARWLVSPSVAVLVLWMAIPLAMTIWFSFSRYNLL
CCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NPDLKGFAGFDNYKYLASDPSFGPSIGHTLELIISVLLITVVGGVLMAILFDRKFYGQGI
CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLAIAPFFVMPTVSALIWKNMILHPVYGLIAQGMRAMGMTPIDWFAEYPLFAVIMIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
WQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPFSMFFYITLPHLKRAIAVVVMMETIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIFAEIYTTTGGGPGTATTNLSYLIYSLGLQQFDVGLASAGGILAVVLANIVSFFLVRM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHH
LAKNLKGEYEK
HHHHHCCCCCC
>Mature Secondary Structure
MRPLRLPLMHAHPQTEKERETRKANSARWLVSPSVAVLVLWMAIPLAMTIWFSFSRYNLL
CCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NPDLKGFAGFDNYKYLASDPSFGPSIGHTLELIISVLLITVVGGVLMAILFDRKFYGQGI
CCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLAIAPFFVMPTVSALIWKNMILHPVYGLIAQGMRAMGMTPIDWFAEYPLFAVIMIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
WQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPFSMFFYITLPHLKRAIAVVVMMETIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIFAEIYTTTGGGPGTATTNLSYLIYSLGLQQFDVGLASAGGILAVVLANIVSFFLVRM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHH
LAKNLKGEYEK
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]