| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mviN [H]
Identifier: 91785020
GI number: 91785020
Start: 4041276
End: 4042826
Strand: Reverse
Name: mviN [H]
Synonym: Bxe_A0760
Alternate gene names: 91785020
Gene position: 4042826-4041276 (Counterclockwise)
Preceding gene: 91785022
Following gene: 91785019
Centisome position: 82.58
GC content: 63.12
Gene sequence:
>1551_bases ATGAATCTATTCCGAGCCCTGCTGACGGTCAGCGGCTTCACGCTGCTGTCGCGCGTGACCGGACTGGCCCGCGAAACGCT GATCGCACGCGCGTTCGGTGCCAGTCAATACACTGACGCGTTTTACGTCGCCTTCCGCATTCCGAACCTGCTGCGCCGCA TCTCCGCCGAAGGCGCGTTCTCGCAGGCCTTCGTGCCGATCCTCGCCGAGTTCAAGAACCAGCAGGGCCACGACGCCACC AAGGCGCTGGTCGACGCCACGTCGACAGTGCTCGCCTGGGCGCTCGCGGTCCTCTCGCTGATCGGCGTGGTAGGCGCCAC GGGCGTGGTGTTCGTCGTTGCCTCGGGTCTCGCGCATGAAGGTCATGCGTACGCACTCGCGGTCACCATGACGCGCATCA TGTTCCCGTACATCATTTTCATTTCGCTGACGTCGCTGGCGTCGGGCGTGCTGAATACGTACAAGAACTTCTCGCTGCCC GCGTTCGCGCCGGTTCTGCTGAACGTCGCGTTCATCGTCGCCGCGGTGTTCGTTGCGCCACGCCTGCAAACGCCGGTCTA TGCGCTCGCCTGGGCAGTGATCGCGGGCGGCGTGCTGCAGTTCCTGGTGCAACTGCCGGGTCTGAAGAAGATCGACATGA TTCCGCGCATCGGCCTGAATCCCGTGAAGGCGCTTGCGCATCGCGGCGTGAAGCGTGTGCTGTCCAAGATGGTGCCCGCG ATGTTCGCTGTCTCGGTCGCGCAGATCAGCCTGATCATCAACACGAATATCGCGTCGCGCATCGGCCCCGGGGCCGTGTC CTGGATCAACTACGCCGACCGGCTGATGGAGTTTCCCACCGCGCTGCTGGGCGTCGCGCTCGGCACGATCCTGCTGCCGA GCCTCTCCAAGGCGCACGTCGACGCCGACCCGCACGAGTATTCGTCGCTGCTCGACTGGGGCCTGCGTGTCACCTTCCTG CTCGCCGCGCCGAGCGCTGTCGCGCTGTTTTTCTTCGCGCAGCCGCTGACCGCCACGCTGTTCAACTATGGCAAGTTCGA CGGCAACTCGGTGGTGATGGTCGCCCGCGCGCTGGCGGCTTACGGCGTCGGGCTGATCGGTCTGATTCTCATCAAGATCC TTGCGCCGGGTTTCTACGCCAAGCAGGACATCAAGACGCCAGTGAAGATCGGTGTCTTCGTGCTGATCCTCACGCAGCTG AGCAATTATGTGTTCGTGCCGATTTTCGCGCACGCGGGTTTGACGCTGAGCGTCGGACTCGGCGCTTGCGGCAATGCGCT GCTGCTGTTTCTCGGTCTGCGCAAGCGTGGCATCTATACGCCGTCGAGCGGCTGGCTCAGATTCTTCGTGCAGTTGTTCG GCGCCTGTCTGGTGCTGGCCGGCGCCATGCATTGGCTGGCGATCAGCTTCGACTGGATCGGCATGCACAGCCGGCCGGTC GATCGCATGGTGCTGCTCGCAGCGTGCCTCGTTCTGTTCGCCGCGCTATATTTCGGTATGCTTTGGCTGATGGGCTTCAA GTACGCGTATTTCAAAAGGCGAGCGAAGTGA
Upstream 100 bases:
>100_bases GCCGATGCGCCTGTCGTATCGAACGTCTGCGCGGCAAATCGGTCCGAATCGCGTTCCGGCTCGTCGTCCGCACTTGCGGC ACCCGTATAATAAGCGCCCC
Downstream 100 bases:
>100_bases TCACGATGACGCGAGTTCTCGACTATTTCAGCACGCTGGTCGCCGAAGACGACAGTCTTCCGCTGACCGAGGCGGCGCTC TCGCTCGCGCAGGACGCTTA
Product: virulence factor MVIN-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAVLSLIGVVGATGVVFVVASGLAHEGHAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLP AFAPVLLNVAFIVAAVFVAPRLQTPVYALAWAVIAGGVLQFLVQLPGLKKIDMIPRIGLNPVKALAHRGVKRVLSKMVPA MFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADPHEYSSLLDWGLRVTFL LAAPSAVALFFFAQPLTATLFNYGKFDGNSVVMVARALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLILTQL SNYVFVPIFAHAGLTLSVGLGACGNALLLFLGLRKRGIYTPSSGWLRFFVQLFGACLVLAGAMHWLAISFDWIGMHSRPV DRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRRAK
Sequences:
>Translated_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAVLSLIGVVGATGVVFVVASGLAHEGHAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLP AFAPVLLNVAFIVAAVFVAPRLQTPVYALAWAVIAGGVLQFLVQLPGLKKIDMIPRIGLNPVKALAHRGVKRVLSKMVPA MFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADPHEYSSLLDWGLRVTFL LAAPSAVALFFFAQPLTATLFNYGKFDGNSVVMVARALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLILTQL SNYVFVPIFAHAGLTLSVGLGACGNALLLFLGLRKRGIYTPSSGWLRFFVQLFGACLVLAGAMHWLAISFDWIGMHSRPV DRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRRAK >Mature_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAVLSLIGVVGATGVVFVVASGLAHEGHAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLP AFAPVLLNVAFIVAAVFVAPRLQTPVYALAWAVIAGGVLQFLVQLPGLKKIDMIPRIGLNPVKALAHRGVKRVLSKMVPA MFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADPHEYSSLLDWGLRVTFL LAAPSAVALFFFAQPLTATLFNYGKFDGNSVVMVARALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLILTQL SNYVFVPIFAHAGLTLSVGLGACGNALLLFLGLRKRGIYTPSSGWLRFFVQLFGACLVLAGAMHWLAISFDWIGMHSRPV DRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRRAK
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=517, Percent_Identity=53.7717601547389, Blast_Score=499, Evalue=1e-142,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55670; Mature: 55670
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH SQAFVPILAEFKNQQGHDATKALVDATSTVLAWALAVLSLIGVVGATGVVFVVASGLAHE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLPAFAPVLLNVAFIVAAVFVAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC RLQTPVYALAWAVIAGGVLQFLVQLPGLKKIDMIPRIGLNPVKALAHRGVKRVLSKMVPA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC DADPHEYSSLLDWGLRVTFLLAAPSAVALFFFAQPLTATLFNYGKFDGNSVVMVARALAA CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLILTQLSNYVFVPIFAHAGLTLSVGL HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEEECC GACGNALLLFLGLRKRGIYTPSSGWLRFFVQLFGACLVLAGAMHWLAISFDWIGMHSRPV CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCH DRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH SQAFVPILAEFKNQQGHDATKALVDATSTVLAWALAVLSLIGVVGATGVVFVVASGLAHE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLPAFAPVLLNVAFIVAAVFVAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC RLQTPVYALAWAVIAGGVLQFLVQLPGLKKIDMIPRIGLNPVKALAHRGVKRVLSKMVPA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC DADPHEYSSLLDWGLRVTFLLAAPSAVALFFFAQPLTATLFNYGKFDGNSVVMVARALAA CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLILTQLSNYVFVPIFAHAGLTLSVGL HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEEECC GACGNALLLFLGLRKRGIYTPSSGWLRFFVQLFGACLVLAGAMHWLAISFDWIGMHSRPV CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCH DRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]