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The map label for this gene is ychA [C]

Identifier: 91785019

GI number: 91785019

Start: 4040428

End: 4041270

Strand: Reverse

Name: ychA [C]

Synonym: Bxe_A0761

Alternate gene names: 91785019

Gene position: 4041270-4040428 (Counterclockwise)

Preceding gene: 91785020

Following gene: 91785013

Centisome position: 82.55

GC content: 62.87

Gene sequence:

>843_bases
ATGACGCGAGTTCTCGACTATTTCAGCACGCTGGTCGCCGAAGACGACAGTCTTCCGCTGACCGAGGCGGCGCTCTCGCT
CGCGCAGGACGCTTACCCCGATCTCGATCTGCAAGGCGCGCTCGCCGAGATCGACGAGTTGGTGGTGCGCCTGCAGCGGC
GCATGCCGGACGATGCCGACATCAAGCAGAAGGTCGGCATTCTGAACCGGTTCTTCTTCCGTGAACTCGGTTTCGCCAGC
AATCTGAACGATTATTACGACCCCGACAACAGTCATCTGAATGTGGTGCTCAAGCGCCGCCGCGGCATTCCGATTTCGCT
GGCGGTGCTGTATCTGGAGATGGCCGAGCAGATCGGTATTCCGGTGCGCGGCGTGTCATTTCCCGGCCACTTCCTGCTGC
GCGTGACAACGCCCGACGGCGACGTGATGCTCGATCCGACCAGCGGACACTCGCTGTCCGAATCGGAGATGGTGGAGATG
CTGGAACCGTATGTGGCGTCGGCGGGGGAATCGGTGAGCAGGGCGCTGCGCATGCTGCTGCAGCCGGCCACGCGCCGCGA
GATCATCGCGCGCATGCTGCGCAATCTGAAGTCCACGTATCTTCAGACCGAACGCTGGCAGCGCCTGCTGGCGGTGCAGC
AGCGTCTCGTGATCCTGCTGCCGGAGAGTATCGAAGAAGTGCGCGATCGCGGCTTCGCTTATGCGCGACTCGATTACCTG
CGGCCGGCGCTCGAAGACCTGGAGCGCTATCTCGGCGACCGGCCGGATGCCGAAGACGCGACCGTGGTGGAGTCGCAACT
GCATGAATTGCGTCAGCGTACCCAGCACAACGACCGCGACTAG

Upstream 100 bases:

>100_bases
TCGCAGCGTGCCTCGTTCTGTTCGCCGCGCTATATTTCGGTATGCTTTGGCTGATGGGCTTCAAGTACGCGTATTTCAAA
AGGCGAGCGAAGTGATCACG

Downstream 100 bases:

>100_bases
CCGACCGGCAACGCCTGTCAGGAAGGTCAGAAAGAACGGCTCAAACAGAAAACGCCTGCACACGTGCAGGCGTTTTCTAT
TGGCGCGTCCGTATCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTRVLDYFSTLVAEDDSLPLTEAALSLAQDAYPDLDLQGALAEIDELVVRLQRRMPDDADIKQKVGILNRFFFRELGFAS
NLNDYYDPDNSHLNVVLKRRRGIPISLAVLYLEMAEQIGIPVRGVSFPGHFLLRVTTPDGDVMLDPTSGHSLSESEMVEM
LEPYVASAGESVSRALRMLLQPATRREIIARMLRNLKSTYLQTERWQRLLAVQQRLVILLPESIEEVRDRGFAYARLDYL
RPALEDLERYLGDRPDAEDATVVESQLHELRQRTQHNDRD

Sequences:

>Translated_280_residues
MTRVLDYFSTLVAEDDSLPLTEAALSLAQDAYPDLDLQGALAEIDELVVRLQRRMPDDADIKQKVGILNRFFFRELGFAS
NLNDYYDPDNSHLNVVLKRRRGIPISLAVLYLEMAEQIGIPVRGVSFPGHFLLRVTTPDGDVMLDPTSGHSLSESEMVEM
LEPYVASAGESVSRALRMLLQPATRREIIARMLRNLKSTYLQTERWQRLLAVQQRLVILLPESIEEVRDRGFAYARLDYL
RPALEDLERYLGDRPDAEDATVVESQLHELRQRTQHNDRD
>Mature_279_residues
TRVLDYFSTLVAEDDSLPLTEAALSLAQDAYPDLDLQGALAEIDELVVRLQRRMPDDADIKQKVGILNRFFFRELGFASN
LNDYYDPDNSHLNVVLKRRRGIPISLAVLYLEMAEQIGIPVRGVSFPGHFLLRVTTPDGDVMLDPTSGHSLSESEMVEML
EPYVASAGESVSRALRMLLQPATRREIIARMLRNLKSTYLQTERWQRLLAVQQRLVILLPESIEEVRDRGFAYARLDYLR
PALEDLERYLGDRPDAEDATVVESQLHELRQRTQHNDRD

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=215, Percent_Identity=30.6976744186047, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI16306500, Length=215, Percent_Identity=30.6976744186047, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI1787465, Length=261, Percent_Identity=26.4367816091954, Blast_Score=97, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32039; Mature: 31908

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLDYFSTLVAEDDSLPLTEAALSLAQDAYPDLDLQGALAEIDELVVRLQRRMPDDAD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
IKQKVGILNRFFFRELGFASNLNDYYDPDNSHLNVVLKRRRGIPISLAVLYLEMAEQIGI
HHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PVRGVSFPGHFLLRVTTPDGDVMLDPTSGHSLSESEMVEMLEPYVASAGESVSRALRMLL
CCEECCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
QPATRREIIARMLRNLKSTYLQTERWQRLLAVQQRLVILLPESIEEVRDRGFAYARLDYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
RPALEDLERYLGDRPDAEDATVVESQLHELRQRTQHNDRD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRVLDYFSTLVAEDDSLPLTEAALSLAQDAYPDLDLQGALAEIDELVVRLQRRMPDDAD
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
IKQKVGILNRFFFRELGFASNLNDYYDPDNSHLNVVLKRRRGIPISLAVLYLEMAEQIGI
HHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PVRGVSFPGHFLLRVTTPDGDVMLDPTSGHSLSESEMVEMLEPYVASAGESVSRALRMLL
CCEECCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
QPATRREIIARMLRNLKSTYLQTERWQRLLAVQQRLVILLPESIEEVRDRGFAYARLDYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
RPALEDLERYLGDRPDAEDATVVESQLHELRQRTQHNDRD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]