Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is udg [H]

Identifier: 91784807

GI number: 91784807

Start: 3796487

End: 3797890

Strand: Reverse

Name: udg [H]

Synonym: Bxe_A0986

Alternate gene names: 91784807

Gene position: 3797890-3796487 (Counterclockwise)

Preceding gene: 91784808

Following gene: 91784806

Centisome position: 77.57

GC content: 63.32

Gene sequence:

>1404_bases
ATGAAAATCACCATTATCGGCACGGGCTACGTGGGTCTCGTCACTGGCGCGTGTCTCGCCGAGATCGGCCACGACGTCTT
CTGTCTGGACGTCGATCCGCGCAAGATCGAAATCCTCAATAACGGCGGCGTGCCGATTCACGAGCCGGGCTTGCAGGAGA
TGATCGCCCGCACACGCGCGGCGCGCCGCATCACGTTTTCCACCGATGTCGAAGCCGGCGTCGCGCACGGCGACGTGCAG
TTCATCGCCGTCGGCACGCCGCCGGACGAAGACGGTTCGGCCGATCTGCAATATGTGCTCGAAGCGGCCCGCAACATCGG
CCGCACCATGAACGGCTTCAAGGTGATCGTCGACAAATCGACGGTGCCGGTCGGCACCGCGCAGCGCGTGCGCGCGGTGG
TCGAAGAAGAGCTGGCCAAACGCGGACTTGCCGGCAGCGCGCAACACGGCTTCTCGGTGGTGTCCAATCCCGAATTCCTG
AAGGAAGGCGCGGCGGTCGACGACTTCATGCGCCCCGACCGCATCGTGATCGGCCTCGACGAAGACGAAGCCGGCTCGCG
CGCGCGCGAACTGATGAAGCGTCTGTACGCGCCGTTCAACCGCAATCACGAACGCACGCTGTACATGGACGTGCGCTCGG
CCGAATTCACGAAATACGCGGCGAATGCGATGCTCGCCACCCGCATCTCGTTCATGAACGAAATGTCGAATCTGGCGGAC
CGCGTCGGCGCGGATATCGAGGCGGTGCGCCGCGGCATCGGTTCCGATCCACGGATCGGCTATCACTTCCTGTATGCCGG
TTGCGGCTATGGCGGCTCGTGCTTCCCCAAAGACGTCCAGGCGCTGATCCGCACGGCCAGCGAAAGCGGCCACAATCTGC
GCATTCTCGAAGCGGTCGAAGAAGTGAACGACAGGCAGAAAGACGTGCTGGTGCACAAGATCACGAGCAAGCTCGGCAAC
GATCTGAGCGGCCGCACGTTCGCGGTGTGGGGTCTCGCGTTCAAGCCCAATACCGACGACATGCGCGAGGCGCCGAGCCG
CCGCCTGATCGCGGAACTGCTGGCGCGCGGCGCGCATGTGCGCGCGTACGATCCGGTCGCGGTGACCGAAGCGCGCCGCG
TATTCGCCATCGACCTGCATGACGCACCGGAGCAGTTCGCGCGTCTCACCTTCGCGACCACGCAGGACGAAACGCTCACG
GGCGCCGACGCCCTCGTGATCGTGACCGAATGGAAAGAATTCAAGAGCCCGGACTTCGTCCATCTGAAATCGGTGCTGAA
ATCGCCGCTGATTTTCGACGGACGCAACCTGTATGAACCGGACGCGATGACCGAGCTCGGCATCGACTATCACTCGATTG
GACGCCCTTATGCCCAACCCTCTGAACTTCCGGCCGATGTCTGA

Upstream 100 bases:

>100_bases
CCGCGCACGGCAACTGCCCCTGCGCGGGCGGAATTTGCAACATGTTCGTGACCGGCTTCATCGCCGGGAATCATCACCGG
AACCCTCTACCGGATAGCGT

Downstream 100 bases:

>100_bases
GATCGCGCCCGGCGCCGCTCCGTCCACGCCCGCGCCGCAGCTCACCAGCGTGCCGCGCGAACAGCTCGCCGCGGCGCGCG
TGCTGGTGGTGGGCGACGTG

Product: UDP-glucose 6-dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGVPIHEPGLQEMIARTRAARRITFSTDVEAGVAHGDVQ
FIAVGTPPDEDGSADLQYVLEAARNIGRTMNGFKVIVDKSTVPVGTAQRVRAVVEEELAKRGLAGSAQHGFSVVSNPEFL
KEGAAVDDFMRPDRIVIGLDEDEAGSRARELMKRLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEMSNLAD
RVGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVQALIRTASESGHNLRILEAVEEVNDRQKDVLVHKITSKLGN
DLSGRTFAVWGLAFKPNTDDMREAPSRRLIAELLARGAHVRAYDPVAVTEARRVFAIDLHDAPEQFARLTFATTQDETLT
GADALVIVTEWKEFKSPDFVHLKSVLKSPLIFDGRNLYEPDAMTELGIDYHSIGRPYAQPSELPADV

Sequences:

>Translated_467_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGVPIHEPGLQEMIARTRAARRITFSTDVEAGVAHGDVQ
FIAVGTPPDEDGSADLQYVLEAARNIGRTMNGFKVIVDKSTVPVGTAQRVRAVVEEELAKRGLAGSAQHGFSVVSNPEFL
KEGAAVDDFMRPDRIVIGLDEDEAGSRARELMKRLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEMSNLAD
RVGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVQALIRTASESGHNLRILEAVEEVNDRQKDVLVHKITSKLGN
DLSGRTFAVWGLAFKPNTDDMREAPSRRLIAELLARGAHVRAYDPVAVTEARRVFAIDLHDAPEQFARLTFATTQDETLT
GADALVIVTEWKEFKSPDFVHLKSVLKSPLIFDGRNLYEPDAMTELGIDYHSIGRPYAQPSELPADV
>Mature_467_residues
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGVPIHEPGLQEMIARTRAARRITFSTDVEAGVAHGDVQ
FIAVGTPPDEDGSADLQYVLEAARNIGRTMNGFKVIVDKSTVPVGTAQRVRAVVEEELAKRGLAGSAQHGFSVVSNPEFL
KEGAAVDDFMRPDRIVIGLDEDEAGSRARELMKRLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEMSNLAD
RVGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVQALIRTASESGHNLRILEAVEEVNDRQKDVLVHKITSKLGN
DLSGRTFAVWGLAFKPNTDDMREAPSRRLIAELLARGAHVRAYDPVAVTEARRVFAIDLHDAPEQFARLTFATTQDETLT
GADALVIVTEWKEFKSPDFVHLKSVLKSPLIFDGRNLYEPDAMTELGIDYHSIGRPYAQPSELPADV

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=489, Percent_Identity=36.40081799591, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI296040438, Length=391, Percent_Identity=37.0843989769821, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI296040443, Length=333, Percent_Identity=37.8378378378378, Blast_Score=194, Evalue=2e-49,
Organism=Escherichia coli, GI1788340, Length=372, Percent_Identity=29.8387096774194, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI48994968, Length=439, Percent_Identity=27.1070615034169, Blast_Score=142, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17560350, Length=469, Percent_Identity=34.1151385927505, Blast_Score=246, Evalue=1e-65,
Organism=Drosophila melanogaster, GI17136908, Length=486, Percent_Identity=35.3909465020576, Blast_Score=261, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR021157
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR014028
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 51303; Mature: 51303

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGVPIHEPGLQEMIARTRA
CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHH
ARRITFSTDVEAGVAHGDVQFIAVGTPPDEDGSADLQYVLEAARNIGRTMNGFKVIVDKS
HHEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
TVPVGTAQRVRAVVEEELAKRGLAGSAQHGFSVVSNPEFLKEGAAVDDFMRPDRIVIGLD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHCCCCHHHHCCCCEEEEECC
EDEAGSRARELMKRLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEMSNLAD
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVQALIRTASESGHNLRILEAVE
HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
EVNDRQKDVLVHKITSKLGNDLSGRTFAVWGLAFKPNTDDMREAPSRRLIAELLARGAHV
HHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCHHHHHHHHHHHCCCCE
RAYDPVAVTEARRVFAIDLHDAPEQFARLTFATTQDETLTGADALVIVTEWKEFKSPDFV
EECCCHHHHCCCEEEEEECCCCHHHHHHEEEECCCCCCCCCCCEEEEEEEHHHCCCCCHH
HLKSVLKSPLIFDGRNLYEPDAMTELGIDYHSIGRPYAQPSELPADV
HHHHHHCCCCEECCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIEILNNGGVPIHEPGLQEMIARTRA
CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHH
ARRITFSTDVEAGVAHGDVQFIAVGTPPDEDGSADLQYVLEAARNIGRTMNGFKVIVDKS
HHEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
TVPVGTAQRVRAVVEEELAKRGLAGSAQHGFSVVSNPEFLKEGAAVDDFMRPDRIVIGLD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHCCCCHHHHCCCCEEEEECC
EDEAGSRARELMKRLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNEMSNLAD
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVQALIRTASESGHNLRILEAVE
HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
EVNDRQKDVLVHKITSKLGNDLSGRTFAVWGLAFKPNTDDMREAPSRRLIAELLARGAHV
HHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCHHHHHHHHHHHCCCCE
RAYDPVAVTEARRVFAIDLHDAPEQFARLTFATTQDETLTGADALVIVTEWKEFKSPDFV
EECCCHHHHCCCEEEEEECCCCHHHHHHEEEECCCCCCCCCCCEEEEEEEHHHCCCCCHH
HLKSVLKSPLIFDGRNLYEPDAMTELGIDYHSIGRPYAQPSELPADV
HHHHHHCCCCEECCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]