| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pncB [H]
Identifier: 91784741
GI number: 91784741
Start: 3728506
End: 3729744
Strand: Reverse
Name: pncB [H]
Synonym: Bxe_A1052
Alternate gene names: 91784741
Gene position: 3729744-3728506 (Counterclockwise)
Preceding gene: 91784748
Following gene: 91784740
Centisome position: 76.18
GC content: 59.56
Gene sequence:
>1239_bases GTGTCGGGCCTTCCGTTTTCCTGCAGTTCAGTTCGCACCATCATGATTATTACTTCGCTGCTCGACACCGATCTGTACAA GTTCACGATGATGCAAGTGGTCTTGCATCACTTTCCCGCAGCGAACGTCGAATATCGCTTCCGTTGCCGCACGCCGAACG TCGATCTCGTGCCGTATATCGGCGAGATTCGCGACGAAGTGCGCAAGCTCTGCCAACTCCGCTTCACCGACGACGAACTC GACTACCTGCGCCGCATGCGCTTCATCAAGGGCGACTTCATCGAGTTTCTCGCGCTGTTCCATCTGAACGAAAAATACAT TTCGATCGGGCCTTCGCCCAAGGGCAATGGCGAAATCGACATCGAGATCAAGGGGCCGTGGCTGCATACGATCCTGTTCG AGATTCCGATGCTCGCGATCGTCAACGAAGTCTACTTCCGCAACACCCAGCAAAAGCCGGACTATAGCGAAGGGCGCGGC CGTCTCGTCGAGAAGATCAAGCTCCTCGGCGCGCGTCCGGAATTCGCCGACTGCAAGATCGCCGACTACGGTACGCGCCG CCGCTTCTCGAAGCAATGGCACGAGGAAGTGATCCTCAAGCTCAAAGAGGGCCTCGGCGAGCAGTTCGCCGGCACCAGCA ACGTCTTCTACGCAATGAAGCACGGCCTCACGCCGCTCGGCACGATGGCGCACGAATACCTGCAGGCGTGTCAGGCGCTC GGTCCGCGGCTGCGCGATTCGCAGATTTTCGGCTTCGAGATGTGGGCCAAGGAATACCGCGGCGACCTGGGTATCGCGCT GTCCGACGTGTACGGCATGGAGGCGTTCCTGCGCGACTTCGACATGTATTTCTGCAAGCTGTTCGACGGCGCGCGCCACG ATTCCGGCGACCCGTTCGACTGGGGCGAACGTCTGCTCAAGCACTACGAAGCGAATCGCTGCGACCCGCGCACCAAGATC CTCGTATTTTCCGACGCACTCGACATTCCCAAAGTGCTGCAACTCTACGAGCGCTTTCGCGGCCGCTGCAAGCTGGCGTT CGGCGTGGGCACGAACCTGACCAACGACCTCGGCTATAACCCGCTGCAGATCGTCATCAAGATGGTTCGCTGCAACGGCC AGCCGGTGGCGAAGCTGTCGGACTCGCCGGGCAAGAACATGTGCGAAGACAAGGCTTACCTCGCTTACCTGCGCCAGGTG TTCGGCATTGCGCAGCCCGAGGAAGAGGCGGCGAAGTAA
Upstream 100 bases:
>100_bases CGAGTCCGGCGGCGCGCTGAATCCGGACGCATTCGGGTAACATGCGTGAGGTCGGTGCGCACGGGGCGTGCCGTATGCGC ATGGGTGAGTCGGACCTTTC
Downstream 100 bases:
>100_bases CGCGGCTCGCAGCCGGCTATGGCAACTGGCTATAGCGTAAGCCGCGTGGGCGATGCGCGGCAATCGGCCATTCGGCCAGG GTGGTCGCGCACAAGGCGGC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSGLPFSCSSVRTIMIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPNVDLVPYIGEIRDEVRKLCQLRFTDDEL DYLRRMRFIKGDFIEFLALFHLNEKYISIGPSPKGNGEIDIEIKGPWLHTILFEIPMLAIVNEVYFRNTQQKPDYSEGRG RLVEKIKLLGARPEFADCKIADYGTRRRFSKQWHEEVILKLKEGLGEQFAGTSNVFYAMKHGLTPLGTMAHEYLQACQAL GPRLRDSQIFGFEMWAKEYRGDLGIALSDVYGMEAFLRDFDMYFCKLFDGARHDSGDPFDWGERLLKHYEANRCDPRTKI LVFSDALDIPKVLQLYERFRGRCKLAFGVGTNLTNDLGYNPLQIVIKMVRCNGQPVAKLSDSPGKNMCEDKAYLAYLRQV FGIAQPEEEAAK
Sequences:
>Translated_412_residues MSGLPFSCSSVRTIMIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPNVDLVPYIGEIRDEVRKLCQLRFTDDEL DYLRRMRFIKGDFIEFLALFHLNEKYISIGPSPKGNGEIDIEIKGPWLHTILFEIPMLAIVNEVYFRNTQQKPDYSEGRG RLVEKIKLLGARPEFADCKIADYGTRRRFSKQWHEEVILKLKEGLGEQFAGTSNVFYAMKHGLTPLGTMAHEYLQACQAL GPRLRDSQIFGFEMWAKEYRGDLGIALSDVYGMEAFLRDFDMYFCKLFDGARHDSGDPFDWGERLLKHYEANRCDPRTKI LVFSDALDIPKVLQLYERFRGRCKLAFGVGTNLTNDLGYNPLQIVIKMVRCNGQPVAKLSDSPGKNMCEDKAYLAYLRQV FGIAQPEEEAAK >Mature_411_residues SGLPFSCSSVRTIMIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPNVDLVPYIGEIRDEVRKLCQLRFTDDELD YLRRMRFIKGDFIEFLALFHLNEKYISIGPSPKGNGEIDIEIKGPWLHTILFEIPMLAIVNEVYFRNTQQKPDYSEGRGR LVEKIKLLGARPEFADCKIADYGTRRRFSKQWHEEVILKLKEGLGEQFAGTSNVFYAMKHGLTPLGTMAHEYLQACQALG PRLRDSQIFGFEMWAKEYRGDLGIALSDVYGMEAFLRDFDMYFCKLFDGARHDSGDPFDWGERLLKHYEANRCDPRTKIL VFSDALDIPKVLQLYERFRGRCKLAFGVGTNLTNDLGYNPLQIVIKMVRCNGQPVAKLSDSPGKNMCEDKAYLAYLRQVF GIAQPEEEAAK
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=392, Percent_Identity=42.8571428571429, Blast_Score=331, Evalue=6e-92, Organism=Saccharomyces cerevisiae, GI6324783, Length=417, Percent_Identity=29.2565947242206, Blast_Score=190, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 47479; Mature: 47348
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLPFSCSSVRTIMIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPNVDLVPYI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH GEIRDEVRKLCQLRFTDDELDYLRRMRFIKGDFIEFLALFHLNEKYISIGPSPKGNGEID HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE IEIKGPWLHTILFEIPMLAIVNEVYFRNTQQKPDYSEGRGRLVEKIKLLGARPEFADCKI EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE ADYGTRRRFSKQWHEEVILKLKEGLGEQFAGTSNVFYAMKHGLTPLGTMAHEYLQACQAL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GPRLRDSQIFGFEMWAKEYRGDLGIALSDVYGMEAFLRDFDMYFCKLFDGARHDSGDPFD CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH WGERLLKHYEANRCDPRTKILVFSDALDIPKVLQLYERFRGRCKLAFGVGTNLTNDLGYN HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC PLQIVIKMVRCNGQPVAKLSDSPGKNMCEDKAYLAYLRQVFGIAQPEEEAAK HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure SGLPFSCSSVRTIMIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPNVDLVPYI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH GEIRDEVRKLCQLRFTDDELDYLRRMRFIKGDFIEFLALFHLNEKYISIGPSPKGNGEID HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE IEIKGPWLHTILFEIPMLAIVNEVYFRNTQQKPDYSEGRGRLVEKIKLLGARPEFADCKI EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE ADYGTRRRFSKQWHEEVILKLKEGLGEQFAGTSNVFYAMKHGLTPLGTMAHEYLQACQAL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH GPRLRDSQIFGFEMWAKEYRGDLGIALSDVYGMEAFLRDFDMYFCKLFDGARHDSGDPFD CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH WGERLLKHYEANRCDPRTKILVFSDALDIPKVLQLYERFRGRCKLAFGVGTNLTNDLGYN HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC PLQIVIKMVRCNGQPVAKLSDSPGKNMCEDKAYLAYLRQVFGIAQPEEEAAK HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA