Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yceD [C]

Identifier: 91784723

GI number: 91784723

Start: 3710029

End: 3710682

Strand: Reverse

Name: yceD [C]

Synonym: Bxe_A1069

Alternate gene names: 91784723

Gene position: 3710682-3710029 (Counterclockwise)

Preceding gene: 91784726

Following gene: 91784722

Centisome position: 75.79

GC content: 61.16

Gene sequence:

>654_bases
ATGACTCAACATCCTGGCAACCCTGCAGGTCTGCCCGACCCGCATAACCTCGATCTGTTCGAATTTGCGCGGAGTGGGCG
TCAGGCCGCGGGTGTCGTGCGCGTCTCGCAACTGCCGCGCATGTTAAACGAAGTCCCGGCAGAAGCGCCAGACCGCGATA
CCGCGTTCACCTGGCAAGCCGAAGGGACGACGCAGCCGGAATTGCAGGACGACGGCACCGAGGGTCCCCAGCCTTATTTG
AGGTTGGCGATTCACGGCGCCGCATGGCTCGAATGTCAGCGGTGCATGACGCCGTACCTGCAGGCATTCAACGTCGACGC
AACTTATCGGGTCGTCAACACTGAGGCGGAAGCCGAAGAGTTTCCGCTCGACGAGGATGAAGTCGAAGTGATCGTGGGCT
CGAACCATTTCGATCTCATCGACTTGATCGAAGAAGAGTTGCTGCTTTCCTTGCCGCTCGTGCCCAAGCACGAAGTCTGC
CCCGAAGTGCACGAGAGCCTCGTTTCTGGTGTGGCCGGTGCTGAAGGCGAGGAAGATGAGAGCGACGAAAGCGCACCGGA
CGAAGCGGGCAAGGGTGACGAGCCCGAGCGGCCCAGTCCGTTTGCGGCGCTCCAGAGTCTCAAGCGCGGTGAGCCGGACG
ACAAGAAGCACTGA

Upstream 100 bases:

>100_bases
CCAGGCGTGTAACGCTGCGGTGCGCAACGCATGGGGCTCGCAGGTCGTCTCGCAAACCAGTTATATCCTCGGCGAAACCC
TTGCCGACGCAGGAGCGCAC

Downstream 100 bases:

>100_bases
ACAGTTGCATTGGAGCGCGATGCGGGCGCATTGGCCATTCGGCCAGTGGCGGACACCGGGTCGGGCTGTGTTAGAATCCG
AAAAATTTTTAGGAGTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTQHPGNPAGLPDPHNLDLFEFARSGRQAAGVVRVSQLPRMLNEVPAEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYL
RLAIHGAAWLECQRCMTPYLQAFNVDATYRVVNTEAEAEEFPLDEDEVEVIVGSNHFDLIDLIEEELLLSLPLVPKHEVC
PEVHESLVSGVAGAEGEEDESDESAPDEAGKGDEPERPSPFAALQSLKRGEPDDKKH

Sequences:

>Translated_217_residues
MTQHPGNPAGLPDPHNLDLFEFARSGRQAAGVVRVSQLPRMLNEVPAEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYL
RLAIHGAAWLECQRCMTPYLQAFNVDATYRVVNTEAEAEEFPLDEDEVEVIVGSNHFDLIDLIEEELLLSLPLVPKHEVC
PEVHESLVSGVAGAEGEEDESDESAPDEAGKGDEPERPSPFAALQSLKRGEPDDKKH
>Mature_216_residues
TQHPGNPAGLPDPHNLDLFEFARSGRQAAGVVRVSQLPRMLNEVPAEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYLR
LAIHGAAWLECQRCMTPYLQAFNVDATYRVVNTEAEAEEFPLDEDEVEVIVGSNHFDLIDLIEEELLLSLPLVPKHEVCP
EVHESLVSGVAGAEGEEDESDESAPDEAGKGDEPERPSPFAALQSLKRGEPDDKKH

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23830; Mature: 23699

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHPGNPAGLPDPHNLDLFEFARSGRQAAGVVRVSQLPRMLNEVPAEAPDRDTAFTWQA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
EGTTQPELQDDGTEGPQPYLRLAIHGAAWLECQRCMTPYLQAFNVDATYRVVNTEAEAEE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
FPLDEDEVEVIVGSNHFDLIDLIEEELLLSLPLVPKHEVCPEVHESLVSGVAGAEGEEDE
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCCCCCCC
SDESAPDEAGKGDEPERPSPFAALQSLKRGEPDDKKH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQHPGNPAGLPDPHNLDLFEFARSGRQAAGVVRVSQLPRMLNEVPAEAPDRDTAFTWQA
CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
EGTTQPELQDDGTEGPQPYLRLAIHGAAWLECQRCMTPYLQAFNVDATYRVVNTEAEAEE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
FPLDEDEVEVIVGSNHFDLIDLIEEELLLSLPLVPKHEVCPEVHESLVSGVAGAEGEEDE
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCCCCCCC
SDESAPDEAGKGDEPERPSPFAALQSLKRGEPDDKKH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA