| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784713
Identifier: 91784713
GI number: 91784713
Start: 3701698
End: 3702342
Strand: Reverse
Name: 91784713
Synonym: Bxe_A1079
Alternate gene names: NA
Gene position: 3702342-3701698 (Counterclockwise)
Preceding gene: 91784714
Following gene: 91784712
Centisome position: 75.62
GC content: 66.67
Gene sequence:
>645_bases ATGGGGAGCATCATGGGGTCGGTCTCGATGCAATTGCAAGCCAGCTCGCGCGGCGAGCGTCTGTCCGCTTTTGTCGACGG TGAACTGGTCGGCGAAGAGCATCTGAATCTGGACGCGTTTCTTTCCGGACTGGACGGCCATGATCGCGCCGCCTGGTCGA GCTATCACCTGATCGGCGACGCCCTGCGTTCCGACGATCTGGCGGTCAGCCCGGCGACGAGCAGCGCTTTCCTGAACGGT TTTGCCGCGCGCTTCGACAACGAGCCGCACGTGCTGGCGCCCACCGCCATGCCGGTCGCACGCCGTTTGCTGGCGCTGCG TCGCCGTGTCGTGCCGGCCTTTGCCGTCGCAGCCGCGGCCGCCACGCTGACGTGGATCGTCGTGCCGCAACTGCAAGGCG TGCCAGGCGGCCCGGGCACGGCGCAACTCGCGTCGGTCCAGTCGCATGGCGACGCGCTGCAGCGCGTGGCTATGGCTTCG GTGCCGGCGGCCACCGTGCAGCCGGTCGCGCAAGACGCCAACATTATTCGCGACGCGAGTCTCGACCAGTATCTGGAAGC TCACCAGCAATTCGCGCAGCAACCGGTCATGCCGGGCTCCATGCCGCTGATTCGCGCTGCCGCTGTTTCTACGCAAGGCC AATAG
Upstream 100 bases:
>100_bases TTGACACACCTGAAGGCAAGCGCTGGTGAACGACCAGCCTGCCGGGCGGGGCGCGGGTGCGATATCTGGATTAGTGGTGT CACTACGGGGTATTTGTAAG
Downstream 100 bases:
>100_bases TTTGATGCAGACTCCGCGGTTGAATAAAACGACTATCTGGGGGCGGCTGCCGGCATTTCTGTTCTGCGCAGCCGTATTGC TGTCCGCCACACCGCGGGTC
Product: anti sigma-E protein, RseA
Products: NA
Alternate protein names: Sigma Factor Negative Regulatory Protein RseA Family; Sigma Factor AlgU Regulatory Protein MucA; Anti Sigma-E Protein RseA Family Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGSIMGSVSMQLQASSRGERLSAFVDGELVGEEHLNLDAFLSGLDGHDRAAWSSYHLIGDALRSDDLAVSPATSSAFLNG FAARFDNEPHVLAPTAMPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQLQGVPGGPGTAQLASVQSHGDALQRVAMAS VPAATVQPVAQDANIIRDASLDQYLEAHQQFAQQPVMPGSMPLIRAAAVSTQGQ
Sequences:
>Translated_214_residues MGSIMGSVSMQLQASSRGERLSAFVDGELVGEEHLNLDAFLSGLDGHDRAAWSSYHLIGDALRSDDLAVSPATSSAFLNG FAARFDNEPHVLAPTAMPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQLQGVPGGPGTAQLASVQSHGDALQRVAMAS VPAATVQPVAQDANIIRDASLDQYLEAHQQFAQQPVMPGSMPLIRAAAVSTQGQ >Mature_213_residues GSIMGSVSMQLQASSRGERLSAFVDGELVGEEHLNLDAFLSGLDGHDRAAWSSYHLIGDALRSDDLAVSPATSSAFLNGF AARFDNEPHVLAPTAMPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQLQGVPGGPGTAQLASVQSHGDALQRVAMASV PAATVQPVAQDANIIRDASLDQYLEAHQQFAQQPVMPGSMPLIRAAAVSTQGQ
Specific function: Unknown
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22401; Mature: 22269
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIMGSVSMQLQASSRGERLSAFVDGELVGEEHLNLDAFLSGLDGHDRAAWSSYHLIGD CCCCCCCCEEEEECCCCCCCEEEEECCEECCHHHCCHHHHHHCCCCCCHHHHHHHHHHHH ALRSDDLAVSPATSSAFLNGFAARFDNEPHVLAPTAMPVARRLLALRRRVVPAFAVAAAA HHCCCCCEECCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ATLTWIVVPQLQGVPGGPGTAQLASVQSHGDALQRVAMASVPAATVQPVAQDANIIRDAS HHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC LDQYLEAHQQFAQQPVMPGSMPLIRAAAVSTQGQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure GSIMGSVSMQLQASSRGERLSAFVDGELVGEEHLNLDAFLSGLDGHDRAAWSSYHLIGD CCCCCCCEEEEECCCCCCCEEEEECCEECCHHHCCHHHHHHCCCCCCHHHHHHHHHHHH ALRSDDLAVSPATSSAFLNGFAARFDNEPHVLAPTAMPVARRLLALRRRVVPAFAVAAAA HHCCCCCEECCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ATLTWIVVPQLQGVPGGPGTAQLASVQSHGDALQRVAMASVPAATVQPVAQDANIIRDAS HHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC LDQYLEAHQQFAQQPVMPGSMPLIRAAAVSTQGQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA