| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is otsB [H]
Identifier: 91784558
GI number: 91784558
Start: 3550403
End: 3551212
Strand: Reverse
Name: otsB [H]
Synonym: Bxe_A1241
Alternate gene names: 91784558
Gene position: 3551212-3550403 (Counterclockwise)
Preceding gene: 91784562
Following gene: 91784557
Centisome position: 72.54
GC content: 65.56
Gene sequence:
>810_bases ATGCGCGGTAAGATGCGCACACTTTTCCGGCCGCACAAGGCTGAAAGGCATAACCAACCGATGCAAGCACTCCCGGCTGT TCTGTCTCCAGGCGAGACGGCATTTTTCTTCGATTTCGACGGCACACTCGTCGAACTCGCTCCCACGCCGGACGGCGTGC TGGTGCAACCTCGCGTGATCGACTTGCTGAGCGAGTTGCGCAGCCTGACGAACGGTGCCGTCGCGGTGGTGTCGGGGCGT GGGATCGACAGCATCGACAGTTTTCTGGGTATTCCCGATCTGCCGATTGCCGGTCTGCACGGCGCCGAACGGCGTGACGC GAACGGCGACACGCAACGCATCGGCTTTCATGACGAGCGGCTCCTGCGCATGGAGCAGGTGCTCGCGCAAGTGGTCAACG AAAACCCCGGCATGCTGCTCGAGATCAAGGGCGCGGCCGTGGCGCTGCACTACCGGAATGCGCCGGACCGCGAGCCGGTG GCGCGCGAGGCAACCAGCCGGCTGGTCGCCGATTACGCCGGCGCCTACGTGTTGCAGCCGGGCAAGATGGTCTACGAAAT CAAACCGAAAGATGTCGACAAGGGCCGCGCGCTGCGCGCCTTTCTCGACGAGCCGCCTTTCGTCGGCCGCCAGCCGGTCT TTGCCGGCGACGATCTGACCGACGAGAAAGGCTTCGCCGTCGTCAACGAACGCGGCGGGCTGTCGATCAAGGTCGGCCCG GGCGAGACGATGGCGCGAACGCGCATCGACTCGGTCCCGGCGCTGCTCGACTGGCTGGCATCGATCGTCGCGGCCGCGCG CGCGGCATGA
Upstream 100 bases:
>100_bases AAGCTTGATTGTTGTCATTTTGAACGCAATCGACGGCGGTGCATGCGGGTGGCGCCCGGCTGGGCTTGTGTCCAGCCTTA CTTTCTCGAAAAATTGACGG
Downstream 100 bases:
>100_bases TGGCCATGCCGCATTGCTCAGAACCTATAACAAACCGCATCGGGAATCGTGCTTCATGGGCCGACTGATCATCGTATCGA ACCGGGTTGCGCCGATCTCG
Product: trehalose-phosphatase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRGKMRTLFRPHKAERHNQPMQALPAVLSPGETAFFFDFDGTLVELAPTPDGVLVQPRVIDLLSELRSLTNGAVAVVSGR GIDSIDSFLGIPDLPIAGLHGAERRDANGDTQRIGFHDERLLRMEQVLAQVVNENPGMLLEIKGAAVALHYRNAPDREPV AREATSRLVADYAGAYVLQPGKMVYEIKPKDVDKGRALRAFLDEPPFVGRQPVFAGDDLTDEKGFAVVNERGGLSIKVGP GETMARTRIDSVPALLDWLASIVAAARAA
Sequences:
>Translated_269_residues MRGKMRTLFRPHKAERHNQPMQALPAVLSPGETAFFFDFDGTLVELAPTPDGVLVQPRVIDLLSELRSLTNGAVAVVSGR GIDSIDSFLGIPDLPIAGLHGAERRDANGDTQRIGFHDERLLRMEQVLAQVVNENPGMLLEIKGAAVALHYRNAPDREPV AREATSRLVADYAGAYVLQPGKMVYEIKPKDVDKGRALRAFLDEPPFVGRQPVFAGDDLTDEKGFAVVNERGGLSIKVGP GETMARTRIDSVPALLDWLASIVAAARAA >Mature_269_residues MRGKMRTLFRPHKAERHNQPMQALPAVLSPGETAFFFDFDGTLVELAPTPDGVLVQPRVIDLLSELRSLTNGAVAVVSGR GIDSIDSFLGIPDLPIAGLHGAERRDANGDTQRIGFHDERLLRMEQVLAQVVNENPGMLLEIKGAAVALHYRNAPDREPV AREATSRLVADYAGAYVLQPGKMVYEIKPKDVDKGRALRAFLDEPPFVGRQPVFAGDDLTDEKGFAVVNERGGLSIKVGP GETMARTRIDSVPALLDWLASIVAAARAA
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=248, Percent_Identity=43.1451612903226, Blast_Score=199, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320279, Length=251, Percent_Identity=25.4980079681275, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI19920676, Length=240, Percent_Identity=28.75, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 29181; Mature: 29181
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGKMRTLFRPHKAERHNQPMQALPAVLSPGETAFFFDFDGTLVELAPTPDGVLVQPRVI CCCCCCHHHCCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCEEECHHHH DLLSELRSLTNGAVAVVSGRGIDSIDSFLGIPDLPIAGLHGAERRDANGDTQRIGFHDER HHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCHHH LLRMEQVLAQVVNENPGMLLEIKGAAVALHYRNAPDREPVAREATSRLVADYAGAYVLQP HHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECC GKMVYEIKPKDVDKGRALRAFLDEPPFVGRQPVFAGDDLTDEKGFAVVNERGGLSIKVGP CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCEEEEECC GETMARTRIDSVPALLDWLASIVAAARAA CCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGKMRTLFRPHKAERHNQPMQALPAVLSPGETAFFFDFDGTLVELAPTPDGVLVQPRVI CCCCCCHHHCCCHHHHCCCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCEEECHHHH DLLSELRSLTNGAVAVVSGRGIDSIDSFLGIPDLPIAGLHGAERRDANGDTQRIGFHDER HHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCHHH LLRMEQVLAQVVNENPGMLLEIKGAAVALHYRNAPDREPVAREATSRLVADYAGAYVLQP HHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECC GKMVYEIKPKDVDKGRALRAFLDEPPFVGRQPVFAGDDLTDEKGFAVVNERGGLSIKVGP CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCEEEEECC GETMARTRIDSVPALLDWLASIVAAARAA CCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]